Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  230 bits (586), Expect = 4e-65
 Identities = 133/338 (39%), Positives = 202/338 (59%), Gaps = 24/338 (7%)

Query: 9   LVEGKNLVKDFAINSNAL------------KQPMMRAINDVSFKMYKSRGLSVVGESGSG 56
           L+  +N+VK F I+   L            K+ ++ A+NDVSF + +   LSVVGESG G
Sbjct: 6   LLNLRNVVKHFDISGGFLDQLRLTGSGIVRKRTVVHAVNDVSFTINEGETLSVVGESGCG 65

Query: 57  KSTTAKMIAKMYAPTSGVIEYKGRDIQDIVSRDDLMHYREGVQMVWQDPFGSLNPTHTIF 116
           KST A+ +  +Y P SG I Y+ R I D +S  +++ YR  +QMV+QDP+ SLNP   + 
Sbjct: 66  KSTLARTVIGLYRPNSGEIHYRDRRI-DHLSDTEMLPYRTRMQMVFQDPYASLNPRMRVN 124

Query: 117 HHIARPLLIHKKVTPG-NKKELEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLA 175
             +  P+  H    PG  + E+ +RV  ++EQVG+ P  AT  +YPH+ SGGQRQR+++A
Sbjct: 125 QILEEPIRFHN---PGIGEGEVLDRVAAVMEQVGINPVWAT--RYPHEFSGGQRQRISIA 179

Query: 176 RNIAVGAEVVLADEPTSMLDVSIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAEDLA 235
           R +AV  E ++ADEP S LDVSI+A VLNLM +M+ +R ++ L+I+HD++   +I+  +A
Sbjct: 180 RALAVDPEFIVADEPISALDVSIQAQVLNLMMDMQEQRNLTYLFISHDLSVVEHISTRVA 239

Query: 236 VMYVGHMVEWGDTDEIIHDPQHPYTKLLVSAVP--DPKKSIHEKLEGNKGEIPLWTPNSV 293
           VMY+G + E   ++++   P+HPYT+ L+SA+P    K   H +L    G++P       
Sbjct: 240 VMYLGSLCELATSEDLFGSPRHPYTQALLSAIPRIGQKGLKHIRL---SGDVPTPINLPS 296

Query: 294 GCPFAGRCLYASAKCREALPEVTQLSDNHFVRCYLFEK 331
           GC F GRC +A  +C   +P          V C+  E+
Sbjct: 297 GCVFHGRCPHADKRCMNEVPRALPQPGGALVACHAVEE 334