Pairwise Alignments

Query, 637 a.a., beta-N-acetylhexosaminidase from Vibrio cholerae E7946 ATCC 55056

Subject, 888 a.a., Beta-N-acetylhexosaminidase (RefSeq) from Shewanella loihica PV-4

 Score =  226 bits (575), Expect = 4e-63
 Identities = 201/695 (28%), Positives = 308/695 (44%), Gaps = 124/695 (17%)

Query: 28  DQDLHDWSLYFVIDRYIQPMSVTNGQLTQV-GSLCSIVPTEKV----------LQANGHF 76
           D D  DW++Y+   R ++ +     +LTQV G L  I PTE+           +   G  
Sbjct: 89  DFDRKDWAIYYSQMRPVKQVLTDAFELTQVKGDLHRITPTERFSGFQKDQPVDIAFLGEL 148

Query: 77  YCEFIIKTAP-YHFYTDGVKHAFVQLN----------DKQPVERINVAVN---------- 115
           +        P Y+    G+K   +             +++P     V+            
Sbjct: 149 WQLSETDAMPNYYIVVPGLKPELISSTQLTVDASTGMEQRPYVETYVSAESQYKRSDTDK 208

Query: 116 -----PIVLASPFRERSQIPEVTAAELCLIPKPNSLQRFQGEFVVNHSSQISLQSDSAAR 170
                P VL    ++    PE+  A   +IP P          V++ +S   L + S A+
Sbjct: 209 LKWATPQVLFDANQDIESRPEL--AVNAIIPTPKRQIVTSQSPVLSLASGYHLDAGSVAK 266

Query: 171 AARWLEQELHALHEF--KLNTVGHSDIVYRSNPTLDEGHYQLNIEAQGIKIEAGSHSGFM 228
           A+  +E  L  L     K +  G    +  S   L EG Y+L+I + GI I A   +GF 
Sbjct: 267 AS--VEAALARLAHLGVKPSPQGIPLKLEPSTTKLAEGGYRLDITSDGITIGASDDAGFS 324

Query: 229 HASATLLQLAQAHQGSLRFPLVNIVDAPRFKYRGMMLDCARHFHSLEQVKRVINQLAHYK 288
           +  A+L  L      SL   ++   D PR+ +RGM +D AR+FHS + +  +++Q+A YK
Sbjct: 325 YGLASLTSLISLDTLSLNAMMIE--DEPRYDFRGMHVDVARNFHSKQFILDLLDQMAAYK 382

Query: 289 FNVFHWHLTDDEGWRIEIKRLPQLTDIGAWRGMDEVLEPQYSLLTE---------RHGGF 339
            N  H H+ DDEGWR+EI  LP+LT +G+ R  D  L+    LL +         +  GF
Sbjct: 383 LNKLHLHMADDEGWRLEIDGLPELTLVGSRRCHD--LQEDTCLLPQLGSGPDGDSKVNGF 440

Query: 340 YTQDEIRAVIEYASDRGITVIPEIDVPGHSRAAIKALPA-----------------WLVD 382
           Y++ +   +++YA  R I VIP +D+PGHSRAAIK++ A                  L+D
Sbjct: 441 YSKADYIEILKYAGARQIQVIPSMDMPGHSRAAIKSMEARYRRLMAEGNEAAANEYRLID 500

Query: 383 EEDCSQYRSIQYYNDNVLSPALPGTYQFLDIVLEEVAALFPS-----QFIHIGADEVPHG 437
             D ++Y SIQYY+DN L+  +  +Y F+D V+ E++ L  +     +  HIGADE   G
Sbjct: 501 PLDKTRYASIQYYDDNTLNVCMDSSYHFVDKVVSEISKLHQAAGQSLELYHIGADETA-G 559

Query: 438 VWVDSPKCQALM--QEQGYTDPKELQGHLLRYAEKKLKSLGKRMVGWEEAHHGDK----- 490
            WVDSP CQAL+  +E G         + +      L   G    GW +     +     
Sbjct: 560 AWVDSPVCQALLADKESGLDSEAHFGAYFIERVANMLADKGIETAGWSDGMSHTRPERMP 619

Query: 491 VSKDTVIYSWLSE---KAALDCAKQGFDVILQPGQFTYLDIVQDYAPEEPGVDWAGVTPL 547
            +  T I+  ++    + A   A  G+D +L   +  Y D   +  P+E G  WA  +  
Sbjct: 620 ANNQTNIWDVVAHGGYQRAHAQANLGWDTVLSNPEVLYFDFPYEADPKEHGYYWASRSTN 679

Query: 548 ER-AYGYEPLADVPAN----------------------------DPLRK--RILGIQCAL 576
           ER  + + P  ++PAN                             PL +  R  GIQ  L
Sbjct: 680 ERKLFSFMP-DNLPANAEQWTDIEGKPFEADDTLKLDDAGKRLSGPLNQGVRFKGIQGQL 738

Query: 577 WCELINNSERMEYMLYPRLTALAEGGWTEKSQRDW 611
           W E I + + +EYM++PRL  LAE  W    + DW
Sbjct: 739 WSETIRSDQVVEYMVFPRLLVLAERAW---HKADW 770