Pairwise Alignments

Query, 637 a.a., beta-N-acetylhexosaminidase from Vibrio cholerae E7946 ATCC 55056

Subject, 896 a.a., beta-hexosaminidase b precursor (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  243 bits (621), Expect = 2e-68
 Identities = 205/693 (29%), Positives = 312/693 (45%), Gaps = 123/693 (17%)

Query: 33  DWSLYFVIDRYIQPMSVTNGQLTQV-GSLCSIVPTE----------KVLQANGHFYCEFI 81
           +W++YF   R +Q +      +T + G L  I PTE          K L+  G  +    
Sbjct: 95  EWAIYFSQMRPVQSVEGKEFSITHIKGDLYRIAPTEAFSGFSKGVKKTLRFRGELWQLSE 154

Query: 82  IKTAPYHFYTDG----VKHAFVQLNDKQPVERINVA--------------------VNPI 117
               P ++   G    V  A  Q+  + P  R+ V                     + P 
Sbjct: 155 TDAMPNYYIVAGDLSPVVIASTQVK-QDPETRMEVRPYVEPFTDMVKQYSRTDADKLAPA 213

Query: 118 VLASPFRERSQIPE-VTAAELCLIPKPNSLQRFQGEFVVNHSSQI-----SLQSDSAARA 171
             +  F     + E  + A   +IP P ++     + VV+ SS I     S+ S SA + 
Sbjct: 214 TASQLFSNNQNVSEDASLAVNTIIPTPKTVVLHSNDKVVSLSSGIKLDVASVSSPSAEKQ 273

Query: 172 ARWLEQELHALHEFKLNTVGHSD---IVYRSNPTLDEGHYQLNIEAQGIKIEAGSHSGFM 228
           +   +Q   AL       V  S+   ++  S     EG Y L+I+  GIKI AG  +GF 
Sbjct: 274 SFKTDQVAAALERLARLGVKESEQGLVMKLSWRQGAEGSYLLDIKPDGIKIAAGDAAGFS 333

Query: 229 HASATLLQLAQAHQGSLRFPLVNIVDAPRFKYRGMMLDCARHFHSLEQVKRVINQLAHYK 288
           +A ++L  L       LR   + I D+PR+ +RGM +D AR+FHS   +  +I+Q+A YK
Sbjct: 334 YALSSLTSLIDVQD--LRVNAMTIEDSPRYPFRGMHIDVARNFHSKAMIFALIDQMAAYK 391

Query: 289 FNVFHWHLTDDEGWRIEIKRLPQLTDIGAWRGMDEVLEPQYSLLTE---------RHGGF 339
            N  H H+ DDEGWR+EI  LP+LTDIG+ R  D  LE    LL +            GF
Sbjct: 392 LNKLHLHMADDEGWRLEIDGLPELTDIGSKRCHD--LEENTCLLPQLGSGPFAESSVNGF 449

Query: 340 YTQDEIRAVIEYASDRGITVIPEIDVPGHSRAAIKALPA-----------------WLVD 382
           Y++ +   +++YA+ R I VIP +D+PGHSRAAIK++ A                  L D
Sbjct: 450 YSKQDYIDILKYANARQIQVIPSMDMPGHSRAAIKSMEARYRKLLAQGKPTEAKTYLLSD 509

Query: 383 EEDCSQYRSIQYYNDNVLSPALPGTYQFLDIVLEEVAALF-----PSQFIHIGADEVPHG 437
             D + Y S+QYYNDN L+  +  TYQF+D V++E+A L      P    HIGADE   G
Sbjct: 510 AADTTVYSSVQYYNDNTLNVCMESTYQFVDKVIDEIAKLHQAAGQPLTRYHIGADETA-G 568

Query: 438 VWVDSPKCQALM--QEQGYTDPKELQGHLLRYAEKKLKSLGKRMVGWEE-------AHHG 488
            W  SP+C + +   ++G    ++L  + +     +L   G    GW +       ++  
Sbjct: 569 AWKQSPECLSFVANNDKGVKSIEDLGAYFIERISNQLAEKGIEAAGWSDGMSHVRPSYMP 628

Query: 489 DKVSKDT-VIYSWLSEKAALDCAKQGFDVILQPGQFTYLDIVQDYAPEEPGVDWAG-VTP 546
            KV  +   + ++   + A      G+DV+L   +  Y D   +  P+E G  WA   T 
Sbjct: 629 AKVQSNIWDVIAYKGYEHANQQVNNGWDVVLSNPEVLYFDFPYEADPKEHGYYWASRATN 688

Query: 547 LERAYGYEP------------LADVP--ANDPLR--------------KRILGIQCALWC 578
             + + + P            L ++P  A+D  R              K   G+Q  LW 
Sbjct: 689 AHKVFSFMPDNLVANAEQWTDLQNLPFEADDRARTDEKGKKSGPREQGKNFAGLQGQLWS 748

Query: 579 ELINNSERMEYMLYPRLTALAEGGWTEKSQRDW 611
           E I +++ +EYM++PRL  LAE  W    Q +W
Sbjct: 749 ETIRSNDTVEYMIFPRLLMLAERAW---HQAEW 778