Pairwise Alignments

Query, 343 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3

 Score =  322 bits (825), Expect = 9e-93
 Identities = 166/347 (47%), Positives = 236/347 (68%), Gaps = 5/347 (1%)

Query: 1   MSCALLIENLTCQYDAQTVLKSLSLQVNPGEIVCLLGASGCGKTTLLKAIAGLLPLASGQ 60
           M+  L +  +   Y  Q VLK L L +  GEI+ LLG SGCGKTTLL+A+AGL  ++ G+
Sbjct: 1   MTSTLNLHQVHSDYQGQQVLKGLDLTLAQGEILALLGPSGCGKTTLLRAVAGLQAISQGE 60

Query: 61  LSLNCVTLDDGKRWLPPEQRNIGMIFQDYALFPHLTVAQNVGFGLDAMPAKQKEAKIAEM 120
           + +N  T+    +++P EQR IGMIFQDYALFPHLTVA+N+ FG+  +   Q++A++ +M
Sbjct: 61  IQINGKTVSGAGQFVPSEQRGIGMIFQDYALFPHLTVAENILFGVAKLTPAQRKARLDDM 120

Query: 121 LALVHLDAFAERYPHQLSGGQQQRVAIARALAYKPDLLLLDEPFSNIDTQVRHELIIEIR 180
           LALV L+  A+RYPH+LSGGQQQRV+IARALAY+P LLLLDEPFSNID QVRH ++ EIR
Sbjct: 121 LALVKLEGLAKRYPHELSGGQQQRVSIARALAYEPQLLLLDEPFSNIDAQVRHSMMAEIR 180

Query: 181 KIFKQQGVTAIFVTHSREEAFAFADKMAVMNRGVIEQYGTAAELYYQPSSQFVADFLGGG 240
            I KQ+ V+A+FVTHS++EAF FAD +A+ N+GVI Q+G A  LY  P+S++VADFLG G
Sbjct: 181 SILKQRNVSAVFVTHSKDEAFVFADTLAIFNQGVIVQHGRAENLYAAPNSRYVADFLGSG 240

Query: 241 SYLSAKRISETQYQTALGVVEAIARQPIAVEAECKLLLRPQQVQIRAEEESSVTVTEQQF 300
           +YL A+ I      T +G + ++     +     ++ LRPQQ+ + A++    T+TE++F
Sbjct: 241 NYLPAEVIDGHSVVTPIGELRSLTPLSQSHAFNGQVFLRPQQLALSADDAGVGTITERRF 300

Query: 301 MGDHCRYLID---AHGTQLIATSSQPLEL--GQAVSVNIDTQGVLAF 342
           +G  C Y +    A     +   SQ ++L  GQ V ++ +   ++ F
Sbjct: 301 LGAFCHYWVKVEAASHAHYVEVRSQIMQLNVGQRVVLSTEPHALVLF 347