Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 527 a.a., Ferric iron ABC transporter, permease protein from Pseudomonas fluorescens FW300-N1B4

 Score =  390 bits (1002), Expect = e-113
 Identities = 213/531 (40%), Positives = 335/531 (63%), Gaps = 22/531 (4%)

Query: 15  LTTLLVLPILAIFYTAFGNSDEVFAHLLATVMPTYIFNTLVLTCSVLLLALLFGVPSAWL 74
           +  L++LP+  + ++      ++++HL  T MP  + NTL L   V     L GV  AWL
Sbjct: 5   IAALVLLPLSVLLFSWQIIDQQIWSHLWDTQMPRLLGNTLTLVLGVGFGVTLLGVSLAWL 64

Query: 75  IAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGWQAGSYWFPD 134
            ++C+ PG RWL WAL+LP A+PAY++ ++F    D+AGP+Q  LR+W G        P 
Sbjct: 65  TSLCEFPGRRWLDWALMLPFAIPAYVLAFVFVGLLDFAGPVQTLLREWFG---SGLRLPR 121

Query: 135 IRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFRRISLPLARPA 194
           +RS GG  +VL LV YPYVYLL R+AF+ Q   L+++AR+L  SPWQ+F R++LP+ARPA
Sbjct: 122 VRSTGGVILVLVLVFYPYVYLLARSAFLAQGKGLMEAARVLGQSPWQAFWRVALPMARPA 181

Query: 195 IAVGLSLVAMETIGDFGTVSLFAVNTLTTAVYDTWLGYSNLNAAAKISAIMLVMVLLLLS 254
           I  G++L  MET+ DFG VS+F  +T TTA+Y TW G+ +L+ AA++++++L++V+++L 
Sbjct: 182 IGAGVALALMETLADFGAVSVFNFDTFTTAIYKTWYGFFSLSTAAQLASLLLLVVMVVLY 241

Query: 255 SERYSRRRQKLYQTQFNSHEEYR----YTLKGWRLWAALIWCWGLVAVAFILPLLQLISY 310
            ER +R   +       S+E  R    Y L+G +  AA+ WC  + A AF++P+LQL+ +
Sbjct: 242 GERRARGANRA------SNERPRVKALYHLRGVKALAAMSWCGLVFACAFVIPVLQLMVW 295

Query: 311 AWTYFAQSWTTQFKEYAINSFTVSISAAVVAVLVALVANFYARLQNNRTSVALMRLSSMG 370
            W         ++    I++  +   AA++ V VALV  F  RL   R   + + L+++G
Sbjct: 296 FWQRGRFDLDERYAGLIIHTLYLGGIAALITVSVALVLAFARRLAPTRAIRSGISLANLG 355

Query: 371 YAVPGTVLAIGILVPVLALDHLINDIAKMMEW----GRPGLVFSGSLFAIVFALVVRFSA 426
           YA+PG+VLA+ I++    LD  +  +  +  W    G+P L+  GSL A++ A +VRF A
Sbjct: 356 YALPGSVLAVSIMLAFSYLDREL--VIPLSGWLGGAGKPLLL--GSLSALLLAYLVRFIA 411

Query: 427 VAIGSIESSLSKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKELN 486
           VA G +ESSL+++ PSL  AAR++G    ++  +V+LPL+  G L A LLVF++ +KE+ 
Sbjct: 412 VAYGPLESSLARIRPSLPEAARSLGVSGPRLFFKVYLPLLLPGTLSAALLVFVDVLKEMP 471

Query: 487 AAILLRPFNFETLATYVYNYASDERLELAALPAILLVLVGLIPLV-MVNRS 536
           A +L+RPF ++TLA  ++   S+     A+LPA+ LVLVGL+P++ ++ RS
Sbjct: 472 ATLLMRPFGWDTLAVRIFEMTSEGEWARASLPALTLVLVGLLPVIGLIRRS 522