Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 538 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  392 bits (1007), Expect = e-113
 Identities = 212/537 (39%), Positives = 331/537 (61%), Gaps = 14/537 (2%)

Query: 8   WKASSLVLTTLLVLPILAIFYTAFGNSDEVFAHLLATVMPTYIFNTLVLTCSVLLLALLF 67
           W      +  L+VLP+  +  +      ++++HLL T M   + NTL+L   V +   L 
Sbjct: 9   WYPLVFAIAALVVLPLSVLLLSWETVDQQIWSHLLETQMARLLSNTLILVLGVGVGVTLL 68

Query: 68  GVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGWQA 127
           GV  AWL ++C+ PG RWL WAL+LP A+PAY++ ++F    D++GP+Q  +R+W G   
Sbjct: 69  GVSLAWLTSLCEFPGRRWLDWALMLPFAIPAYVLAFVFVGLLDFSGPVQTLMREWFG--- 125

Query: 128 GSYWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFRRIS 187
                P +RS GG  +VL LV YPYVYLL R AF+ Q   L+++AR+L  +P Q+F R++
Sbjct: 126 SGLRLPRVRSTGGVIIVLVLVFYPYVYLLARTAFLAQGKGLMEAARVLGNTPLQAFWRVA 185

Query: 188 LPLARPAIAVGLSLVAMETIGDFGTVSLFAVNTLTTAVYDTWLGYSNLNAAAKISAIMLV 247
           LP+ARPAI  G++L  MET+ DFG VS+F  +T TTA+Y TW G+ +L++AA++++++L+
Sbjct: 186 LPMARPAIGAGVALALMETLADFGAVSVFNFDTFTTAIYKTWYGFFSLSSAAQLASLLLL 245

Query: 248 MVLLLLSSERYSRRRQKLYQTQFNSHEEYRYTLKGWRLWAALIWCWGLVAVAFILPLLQL 307
            VL+LL  ER +RR  +    +      YR  L G + WAA  WC  +   AF++P+LQL
Sbjct: 246 AVLVLLYGERRARRASRPANERPRGAALYR--LSGIKAWAASFWCGLVFLCAFVVPMLQL 303

Query: 308 ISYAWTYFAQSWTTQFKEYAINSFTVSISAAVVAVLVALVANFYARLQNNRTSVALMRLS 367
           I + W         ++    +++  +   AA++ V VAL+  F  R+       + + L+
Sbjct: 304 IVWVWQRGRFDLDERYTGLILHTLYLGGMAALITVSVALILAFARRMAPTPAIRSGVSLA 363

Query: 368 SMGYAVPGTVLAIGILVPVLALDHLINDIAKMMEW----GRPGLVFSGSLFAIVFALVVR 423
           ++GYA+PG+VLA+ I++    LD  +  +  +  W    G+P L+  GSL A++ A +VR
Sbjct: 364 NLGYALPGSVLAVSIMLAFSYLDREL--VIPLSGWLGGAGKPLLL--GSLSALLLAYLVR 419

Query: 424 FSAVAIGSIESSLSKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMK 483
           F AVA G +E SLS++ PSL  AAR++G    ++   V+LPL+  GAL A LLVF++ +K
Sbjct: 420 FIAVAFGPLEHSLSRIRPSLPEAARSLGVSGPKLFLNVYLPLLVPGALSAALLVFVDVLK 479

Query: 484 ELNAAILLRPFNFETLATYVYNYASDERLELAALPAILLVLVGLIPLV-MVNRSLEQ 539
           E+ A +L+RPF ++TLA  ++   S+     AALPA+ LVLVGL+P++ ++ RS  Q
Sbjct: 480 EMPATLLMRPFGWDTLAVRIFEMTSEGEWARAALPALSLVLVGLLPVIGLIRRSARQ 536