Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., Sulfate ABC transporter, permease protein CysW from Synechococcus elongatus PCC 7942

 Score = 80.5 bits (197), Expect = 8e-20
 Identities = 67/264 (25%), Positives = 120/264 (45%), Gaps = 30/264 (11%)

Query: 8   WKASSLV------LTTLLVLPILAIFYTAFGNSDEVFAHLLATVMPTYIFN---TLVLTC 58
           W+A  L+      LT +++LP++ +F+ A    + + A+      P  +     TL++T 
Sbjct: 17  WQAYLLIGIGLAFLTAIVLLPLVVVFWEAL--REGLAAYWQGIQQPEALHAIRLTLLITA 74

Query: 59  SVLLLALLFGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIA 118
             + L  LFGV  AW++     PG+  +   L LPL++   + G++            + 
Sbjct: 75  VAIPLNTLFGVAIAWVLVRQSFPGQAIVLALLDLPLSISPVVAGFMLI----------LL 124

Query: 119 LRDWTGWQAGSYWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQ---SARLL 175
                GW A      D++ +     ++  V++  +  + R  F        +   +A+ L
Sbjct: 125 YSPQIGWLADLVNRWDLKIVFATPGLVLTVMFVTIPFVAREVFPVLQTLSREDEEAAQSL 184

Query: 176 KCSPWQSFRRISLPLARPAIAVGLSLVAMETIGDFGTVSLF------AVNTLTTAVYDTW 229
             + WQ+F R++LP+ RPA+  G+ L     IG+FG VS+       + NTLT  V   +
Sbjct: 185 GATTWQTFWRVTLPMIRPALLYGIILSTARAIGEFGAVSVVSGKIIGSTNTLTLHVERVY 244

Query: 230 LGYSNLNAAAKISAIMLVMVLLLL 253
           L Y    A A  S + +V +L L+
Sbjct: 245 LEYQATAAFACASLLAIVALLTLV 268



 Score = 33.1 bits (74), Expect = 1e-05
 Identities = 54/241 (22%), Positives = 93/241 (38%), Gaps = 46/241 (19%)

Query: 295 LVAVAFILPLLQLISYAWTYFAQSWTTQFKEYAINSFTVSISAAVVAVLVALVANFYARL 354
           + AVA  L  L  ++ AW    QS+  Q    A+    +SIS  V   ++ L+ +     
Sbjct: 72  ITAVAIPLNTLFGVAIAWVLVRQSFPGQAIVLALLDLPLSISPVVAGFMLILLYS----- 126

Query: 355 QNNRTSVALMRLSSMGYAVPGTVLAIGILVPVLALDHLINDIAKMMEWGRPGLVFSGSLF 414
                         +G+                 L  L+N     + +  PGLV +    
Sbjct: 127 ------------PQIGW-----------------LADLVNRWDLKIVFATPGLVLT---- 153

Query: 415 AIVFALVVRFSAVAIGSIESSLSKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAG 474
             V  + + F A  +  +  +LS+     + AA+++G    Q   RV LP+IR   L   
Sbjct: 154 --VMFVTIPFVAREVFPVLQTLSRED---EEAAQSLGATTWQTFWRVTLPMIRPALLYGI 208

Query: 475 LLVFIESMKELNAAILLRP---FNFETLATYVYNYASDERLELAALPAILLVLVGLIPLV 531
           +L    ++ E  A  ++      +  TL  +V     + +   A   A LL +V L+ LV
Sbjct: 209 ILSTARAIGEFGAVSVVSGKIIGSTNTLTLHVERVYLEYQATAAFACASLLAIVALLTLV 268

Query: 532 M 532
           +
Sbjct: 269 L 269