Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  437 bits (1123), Expect = e-127
 Identities = 232/530 (43%), Positives = 343/530 (64%), Gaps = 1/530 (0%)

Query: 11  SSLVLTTLLVLPILAIFYTAFGNSDEVFAHLLATVMPTYIFNTLVLTCSVLLLALLFGVP 70
           S+L+ + + V P+  +        + ++ HL +TV+P Y+ NT +L   V L  L+ G  
Sbjct: 15  SALIASIVAVAPLSVLVLALTPEGEAIWGHLASTVLPGYLINTALLLLGVGLGTLVIGTG 74

Query: 71  SAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGWQAG-S 129
            AWL+ + + PG R  +WAL+LPLA+PA+I+G+ +T   DYAGP+Q  LR   GW +   
Sbjct: 75  CAWLVTLYRFPGRRLFEWALLLPLAVPAFILGFTYTELLDYAGPVQATLRALAGWSSPRD 134

Query: 130 YWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFRRISLP 189
           YWFP++RSLGGA ++++LVLYPYVYLL RAAF+EQ++  L+ +R L C+P  +F R++LP
Sbjct: 135 YWFPEVRSLGGAILLMSLVLYPYVYLLARAAFLEQSLCTLEVSRTLGCTPLAAFFRVALP 194

Query: 190 LARPAIAVGLSLVAMETIGDFGTVSLFAVNTLTTAVYDTWLGYSNLNAAAKISAIMLVMV 249
           LARP++ VG++L  ME + D+GTV LF V+TLT+ +Y+ WL   N   AA+I+ ++L  V
Sbjct: 195 LARPSLVVGVALALMEALNDYGTVKLFNVHTLTSGLYNVWLIMGNRQGAAQIACVLLTFV 254

Query: 250 LLLLSSERYSRRRQKLYQTQFNSHEEYRYTLKGWRLWAALIWCWGLVAVAFILPLLQLIS 309
           + L+ +ER +R ++  +     S       L G    AALI C   V + F +P   L+ 
Sbjct: 255 VALIIAERLARAKRAYHGAGGRSRPIEGRPLNGLAGGAALIACALPVVLGFGVPAAVLLR 314

Query: 310 YAWTYFAQSWTTQFKEYAINSFTVSISAAVVAVLVALVANFYARLQNNRTSVALMRLSSM 369
                  ++       YA  S T+S  AA +A+ + L   +  RL  +  +  L RLS +
Sbjct: 315 NTLVRLPEAIDGPLLGYARASLTLSTLAAAIALALGLFLAYAGRLDPSPLTRWLGRLSGL 374

Query: 370 GYAVPGTVLAIGILVPVLALDHLINDIAKMMEWGRPGLVFSGSLFAIVFALVVRFSAVAI 429
           GYA+PGTVLAIG+LVP  A D+ ++   +       GL+ SGSLFA+VFA VVRF A++ 
Sbjct: 375 GYALPGTVLAIGLLVPFGAFDNALDGWMRAHFGLSTGLLLSGSLFALVFAYVVRFLALSF 434

Query: 430 GSIESSLSKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKELNAAI 489
           G+ ES L++V PSLD AAR++GC   Q+L RVHLPLI+   L A LLVF++SMKEL A++
Sbjct: 435 GAAESGLARVRPSLDSAARSLGCRPAQVLARVHLPLIKGSLLTAALLVFVDSMKELPASL 494

Query: 490 LLRPFNFETLATYVYNYASDERLELAALPAILLVLVGLIPLVMVNRSLEQ 539
           LLRPFN ETLAT+V+ +AS E++E AA  A+ +V+ GLIP+++++R++ Q
Sbjct: 495 LLRPFNVETLATHVFQFASSEQIERAAPGALAIVVTGLIPVIVLSRAIAQ 544