Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., Molybdate ABC transporter, permease protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 14/211 (6%)

Query: 64  ALLFGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWT 123
           +L  G+  AWL+A    PG+  L   + LPL +P  +IGYL        G +   L DW 
Sbjct: 26  SLPLGIAFAWLLARRTFPGKTILDGLIHLPLVLPPVVIGYLLLVTLGRNGAVGALLYDWF 85

Query: 124 GWQAGSYWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSF 183
           G      W        GA+V  A++ +P +    R +    +  L  +AR L   P ++F
Sbjct: 86  GLTLAFTW-------RGAAVASAVIAFPLMVQAIRLSIEGVDRGLESAARTLGAGPLRTF 138

Query: 184 RRISLPLARPAIAVGLSLVAMETIGDFGTVSLFAVN------TLTTAVYDTWLGYSNLNA 237
             ++LPL  P I  G+ L     +G+FG    F  N      TL  A+Y      +   A
Sbjct: 139 FTVTLPLVAPGILTGVILGFARCLGEFGATITFVSNIPGQTRTLPLALYTQTQIPNGEVA 198

Query: 238 AAKISAIML-VMVLLLLSSERYSRRRQKLYQ 267
           A ++  I + V ++ LL+SE  SRR  ++ Q
Sbjct: 199 AGRLCLISITVAMIALLASEFLSRRVNRIIQ 229



 Score = 42.4 bits (98), Expect = 2e-08
 Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 22/186 (11%)

Query: 374 PGTVLAIGILVPVLALDHLINDIAKMMEWGRPGLVFSGSL----FAIVFALVVRFSAVA- 428
           PG  +  G++   L L  ++     ++  GR G V  G+L    F +  A   R +AVA 
Sbjct: 43  PGKTILDGLIHLPLVLPPVVIGYLLLVTLGRNGAV--GALLYDWFGLTLAFTWRGAAVAS 100

Query: 429 --------IGSIESSLSKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIE 480
                   + +I  S+  V   L+ AART+G    +    V LPL+  G L   +L F  
Sbjct: 101 AVIAFPLMVQAIRLSIEGVDRGLESAARTLGAGPLRTFFTVTLPLVAPGILTGVILGFAR 160

Query: 481 SMKELNAAILL---RPFNFETLATYVYNYASDERLELAA----LPAILLVLVGLIPLVMV 533
            + E  A I      P    TL   +Y        E+AA    L +I + ++ L+    +
Sbjct: 161 CLGEFGATITFVSNIPGQTRTLPLALYTQTQIPNGEVAAGRLCLISITVAMIALLASEFL 220

Query: 534 NRSLEQ 539
           +R + +
Sbjct: 221 SRRVNR 226