Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., molybdate ABC transporter permease subunit from Rahnella sp. WP5

 Score = 86.7 bits (213), Expect = 8e-22
 Identities = 67/233 (28%), Positives = 108/233 (46%), Gaps = 19/233 (8%)

Query: 45  VMPTYIFNTLVLTCSVLLLALLFGVP----SAWLIAMCKLPGERWLQWALVLPLAMPAYI 100
           ++  Y +  ++L+  V  LA++  +P     AW++A  + PG+  L   + LPL +P  +
Sbjct: 2   MLSEYEWQAVLLSLKVSSLAVVCSLPLGILMAWVLARGRFPGKSLLDSIIHLPLVLPPVV 61

Query: 101 IGYLFTHWFDYAGPIQIALRDWTGWQAGSYWFPDIRSLGGASVVLALVLYPYVYLLCRAA 160
           IGYL        G I   L +W G+     W        GA +  A+V +P +    R +
Sbjct: 62  IGYLLLVVMGRRGFIGQRLYEWFGFSFSFSWH-------GAVLASAVVAFPLMVRAIRQS 114

Query: 161 FMEQNVTLLQSARLLKCSPWQSFRRISLPLARPAIAVGLSLVAMETIGDFGTVSLFAVN- 219
               +  L  +AR L  SPW+ F  I+LPL+ P +  G+ L    ++G+FG    F  N 
Sbjct: 115 LEAVDPKLELAARTLGASPWRVFFTITLPLSVPGVIAGVVLAFARSLGEFGATITFVSNI 174

Query: 220 -----TLTTAVYDTWLGYSNLNAAAK--ISAIMLVMVLLLLSSERYSRRRQKL 265
                T+  A+Y          AAA+  + AI+L +  LL+S     R R +L
Sbjct: 175 PGETRTIPLAMYTLIETPGAEGAAARLCVLAILLSLAALLISDWLAKRSRIRL 227



 Score = 48.5 bits (114), Expect = 3e-10
 Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 21/220 (9%)

Query: 325 EYAINSFTVSISAAVVAVLVALVANFYARLQNNRTSVALMRLSSMGYAVPGTVLAIGILV 384
           EY   +  +S+  + +AV+ +L             +  L R    G ++  +++ + +++
Sbjct: 5   EYEWQAVLLSLKVSSLAVVCSLPLGILM-------AWVLARGRFPGKSLLDSIIHLPLVL 57

Query: 385 PVLALDHLINDIA--------KMMEWGRPGLVFSGSLFAIVFALVVRFSAVAIGSIESSL 436
           P + + +L+  +         ++ EW   G  FS S    V A  V    + + +I  SL
Sbjct: 58  PPVVIGYLLLVVMGRRGFIGQRLYEWF--GFSFSFSWHGAVLASAVVAFPLMVRAIRQSL 115

Query: 437 SKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKELNAAILL---RP 493
             V P L++AART+G    ++   + LPL   G +   +L F  S+ E  A I      P
Sbjct: 116 EAVDPKLELAARTLGASPWRVFFTITLPLSVPGVIAGVVLAFARSLGEFGATITFVSNIP 175

Query: 494 FNFETLATYVYNYASDERLE-LAALPAILLVLVGLIPLVM 532
               T+   +Y        E  AA   +L +L+ L  L++
Sbjct: 176 GETRTIPLAMYTLIETPGAEGAAARLCVLAILLSLAALLI 215