Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella loihica PV-4

 Score =  570 bits (1469), Expect = e-167
 Identities = 291/536 (54%), Positives = 382/536 (71%), Gaps = 5/536 (0%)

Query: 7   AWKASSLVLTTLLVLPILAIFYTAFGNSDEVFAHLLATVMPTYIFNTLVLTCSVLLLALL 66
           +W   S +      LP+ AI   A    + VF HL+ TV+PTYIFNTL L   V L ALL
Sbjct: 8   SWSTLSYLTAICFALPLGAICIQAMVPDEAVFGHLMQTVLPTYIFNTLALMLFVSLGALL 67

Query: 67  FGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGWQ 126
             VP+AW +A C  PG    QWAL+LPLAMPAY++ Y++T   DYAGPIQ  LR   GW 
Sbjct: 68  IAVPAAWCVARCDFPGRNGFQWALLLPLAMPAYVVAYVYTDLLDYAGPIQTWLRQVNGWL 127

Query: 127 AGS-YWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFRR 185
           + + Y+FPD+R+LGGASV+LALVL+PY+YLL R AFMEQ+ +LL ++R++   PW+SF R
Sbjct: 128 SPTDYYFPDVRTLGGASVMLALVLFPYIYLLARTAFMEQSPSLLHASRVMGAGPWRSFWR 187

Query: 186 ISLPLARPAIAVGLSLVAMETIGDFGTVSLFAVNTLTTAVYDTWLGYSNLNAAAKISAIM 245
           ++LP+ARPA+AVG +LVAMET  DF TVS FAV TLTTAVYDTWLGY +L AAAK+SAI+
Sbjct: 188 LNLPMARPALAVGAALVAMETAADFATVSYFAVPTLTTAVYDTWLGYGSLAAAAKLSAII 247

Query: 246 LVMVLLLLSSERYSRRRQKLY--QTQFNSHEEYRYTLKGWRLWAALIWCWGLVAVAFILP 303
           L++V  L+ +ER++RR+Q+L+  QT   SHE  RY L G + W A  +C  L+ +AF LP
Sbjct: 248 LLVVFCLIGAERFARRKQQLFQKQTPITSHE--RYALSGVKAWLAAGYCAVLLLLAFGLP 305

Query: 304 LLQLISYAWTYFAQSWTTQFKEYAINSFTVSISAAVVAVLVALVANFYARLQNNRTSVAL 363
           +  L+ YAW YF  SW   F EY++NS  +++  ++V V+ AL+  F  R    +  +  
Sbjct: 306 VWVLLGYAWDYFDVSWNQAFWEYSLNSLIIALVVSLVTVVFALLLMFVRRCSPRKIDILP 365

Query: 364 MRLSSMGYAVPGTVLAIGILVPVLALDHLINDIAKMMEWGRPGLVFSGSLFAIVFALVVR 423
            RL+S GYA+PGTVLAIG+LVP+  LD  +ND+    +   PGL+FSG+LF ++FA  +R
Sbjct: 366 SRLASTGYALPGTVLAIGVLVPLSLLDFAVNDLYAYFDQSGPGLIFSGTLFVLIFAFAIR 425

Query: 424 FSAVAIGSIESSLSKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMK 483
           F+A+AIGSIE+S  ++SPSLDMA+ TMG   + +L R+HLPL+R G   A LLVFIE MK
Sbjct: 426 FAAIAIGSIENSYKQISPSLDMASVTMGMRPSAILSRIHLPLLRSGIFAAILLVFIECMK 485

Query: 484 ELNAAILLRPFNFETLATYVYNYASDERLELAALPAILLVLVGLIPLVMVNRSLEQ 539
           EL AA+LLRP  FE LATYVY + SDE+LE  AL AI++VLVGLIPL+ +NRSLEQ
Sbjct: 486 ELPAALLLRPVGFENLATYVYQFVSDEQLEQGALGAIVIVLVGLIPLIYLNRSLEQ 541