Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 563 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  144 bits (362), Expect = 1e-38
 Identities = 124/551 (22%), Positives = 247/551 (44%), Gaps = 59/551 (10%)

Query: 11  SSLVLTTLLVLPILAIFYTAFG-----NSDEVFAHLLATVMPTYIFNTLVLTCSVLLLAL 65
           S  VL  ++ +P+L IF+ AF      N  +V   L        + N+L +   V +++ 
Sbjct: 20  SIAVLVIVVAVPVLLIFFNAFWVDGSPNFTDVVKILRQPDTYEALLNSLFIASGVTVMST 79

Query: 66  LFGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFD-YAGPIQIALRDWTG 124
             G   AWL+    LP +  ++   ++P  +P++I    +       AG I     D  G
Sbjct: 80  TIGTFFAWLVTRTDLPFKAAMKVLFLVPFMLPSFIGALAWKMLLSPRAGYINRLFMDTFG 139

Query: 125 WQAGSYWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFR 184
           +    +   DI +  G   V  + L+P+V++    A    + TL ++AR+   S +   R
Sbjct: 140 FSGPVF---DIYTYHGIMAVETMYLFPFVFIQVCGALERMDPTLEEAARISGASLFTITR 196

Query: 185 RISLPLARPAIAVGLSLVAMETIGDFGTVSLFAVN----TLTTAVYD----TWLGYSNLN 236
           +I++PL  P+I  G  L+ + ++  FGTV++  +      + T +Y+    +   + ++ 
Sbjct: 197 KITIPLVMPSIVSGALLIMLYSMAHFGTVAVLGIEIGIFNIPTLIYEKIHQSAGSFQSIR 256

Query: 237 AAAKISAIMLVMVLLLLSSERYSRRRQKLYQTQFNSHEEYRYTLKGWRLWAALIWCWGLV 296
               ++++++V    ++  +     R +       S       L+G+R+   L+ C   +
Sbjct: 257 TGTVLASVLVVTAAAIIWLQNKVLERGRFQIIAGKSFRPMELKLRGFRI-PLLVLCIAYI 315

Query: 297 AVAFILPL--------------------LQLISYAWTYFAQSWTTQFKEYAINSFTVSIS 336
           A   +LP                     L L +Y +  F    T   ++   NS ++ ++
Sbjct: 316 AFTIVLPTATIFLVGGLKTYGLPLTMENLTLDNYKFILFDWQLT---RDAIWNSVSLGLA 372

Query: 337 AAVVAVLVALVANFYARLQNNRTSVALMRLSSMGYAVPGTVLAIGILVPVLALDHLINDI 396
           AA++ +   ++ ++       R    L  L  + ++VPG+V+A+G++             
Sbjct: 373 AALITMFAGVMISYVIVKMKVRGKGFLEFLGMLPFSVPGSVIALGVI------------- 419

Query: 397 AKMMEW-GRPGLVFSGSLFAIVFALVVRFSAVAIGSIESSLSKVSPSLDMAARTMGCHAN 455
              + W G+ G+    +++ I+ A + R+ A ++ +  ++L +V  SL  AAR  G    
Sbjct: 420 ---LAWSGKFGINIYNTVWIILVAYIARYMAFSLKANSAALEQVHDSLVEAARACGATMW 476

Query: 456 QMLKRVHLPLIRRGALIAGLLVFIESMKELNAAILLRPFNFETLATYVYNYASD-ERLEL 514
           Q L+ + LPL+R G L A  L+F+ +++EL  ++LL      T+   +Y    D E +  
Sbjct: 477 QALRDIVLPLVRPGMLAAFFLIFLPALRELTVSVLLYGPTTRTIGVAIYTLNEDGETVYS 536

Query: 515 AALPAILLVLV 525
           AAL  I L+++
Sbjct: 537 AALAGIALIII 547