Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score = 67.0 bits (162), Expect = 8e-16
 Identities = 69/261 (26%), Positives = 115/261 (44%), Gaps = 28/261 (10%)

Query: 12  SLVLTTLLVLPILAIFYT------AFGNSDEVFAHLLATVMPTYIFNTLVLTCSVLLLAL 65
           SL L   ++LP+L +         AF N  EV   LL ++             +  +LA+
Sbjct: 15  SLFLLLFVLLPLLNMILNPGNVAGAF-NDSEVIKSLLVSIKAAG---------TATVLAI 64

Query: 66  LFGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGW 125
             G+P ++L+A     G+  ++  + +P+A+P  +IG +   +F Y   I   + D    
Sbjct: 65  FLGIPLSYLLARYHFTGKNVVEAIIDIPMAIPHSVIGIMILAFF-YGTSIGRGIEDIGFE 123

Query: 126 QAGSYWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFRR 185
              ++W        G  VV+  V  PY+    R  F+     L   +R L  S  ++F  
Sbjct: 124 IVDNFW--------GIVVVMLYVGLPYMVNSGRDGFLMVEEELENVSRTLGASKIKTFFN 175

Query: 186 ISLPLARPAIAVGLSLVAMETIGDFGTVSLFAVNTLTTAV--YDTWLGYSNLNAAAKISA 243
           ISLPL +  +  G  L     I + G + + A    TT V   D +  Y  L+++  IS 
Sbjct: 176 ISLPLIKNNLVSGSILTFARGISEVGAILIVAYFPKTTPVLILDRFNEY-GLSSSKPISV 234

Query: 244 IMLVMVLLLLSSERYSRRRQK 264
           IM+V+ ++L S  R  R  +K
Sbjct: 235 IMIVLSIILFSVFRLVRYNKK 255



 Score = 36.2 bits (82), Expect = 1e-06
 Identities = 40/205 (19%), Positives = 81/205 (39%), Gaps = 12/205 (5%)

Query: 328 INSFTVSISAAVVAVLVALVANFYARLQNNRTSVALMRLSSMGYAVPGTVLAIGILVPVL 387
           I S  VSI AA  A ++A+             S  L R    G  V   ++ I + +P  
Sbjct: 46  IKSLLVSIKAAGTATVLAIFLGI-------PLSYLLARYHFTGKNVVEAIIDIPMAIPHS 98

Query: 388 ALDHLINDIAKMMEWGRP----GLVFSGSLFAIVFALVVRFSAVAIGSIESSLSKVSPSL 443
            +  +I         GR     G     + + IV  ++       + S       V   L
Sbjct: 99  VIGIMILAFFYGTSIGRGIEDIGFEIVDNFWGIVVVMLYVGLPYMVNSGRDGFLMVEEEL 158

Query: 444 DMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKELNAAILLRPFNFETLATYV 503
           +  +RT+G    +    + LPLI+   +   +L F   + E+ A +++  F  +T    +
Sbjct: 159 ENVSRTLGASKIKTFFNISLPLIKNNLVSGSILTFARGISEVGAILIVAYFP-KTTPVLI 217

Query: 504 YNYASDERLELAALPAILLVLVGLI 528
            +  ++  L  +   +++++++ +I
Sbjct: 218 LDRFNEYGLSSSKPISVIMIVLSII 242