Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., ABC transporter permease from Methanococcus maripaludis JJ

 Score = 65.5 bits (158), Expect = 2e-15
 Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 12/254 (4%)

Query: 13  LVLTTLLVLPILAIFYTAFGNSDEVFAHLLATVMPTYIFNTLVLTCSVLLLALLFGVPSA 72
           LV++  L+L +L        N   V   +  + +   +  ++    +   LA+  G+P +
Sbjct: 12  LVISLFLLLFVLLPLLNMILNPGNVAGAIHDSEVIKSLLVSIKAASTATALAIFLGIPLS 71

Query: 73  WLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGWQAGSYWF 132
           +L+A     G+  ++  + +P+A+P  +IG +   +F Y   I        G    +  F
Sbjct: 72  YLLARYHFTGKNVVEAIIDIPMAIPHSVIGIMILAFF-YGTSI--------GRGIENIGF 122

Query: 133 PDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFRRISLPLAR 192
             + +  G  VV+  V  PY+    R  F+  N  L   +R L  S  ++F  ISLPL +
Sbjct: 123 EIVDNFWGIVVVMLYVGLPYMVNSGRDGFLMVNEELENVSRTLGASKIKTFFNISLPLIK 182

Query: 193 PAIAVGLSLVAMETIGDFGTVSLFAVNTLTTAV--YDTWLGYSNLNAAAKISAIMLVMVL 250
             +  G  L     I + G + + A    TT V   D +  Y  L+++  IS IM+V+ +
Sbjct: 183 NNLVSGSILTFARGISEVGAILIVAYFPKTTPVLILDRFNEY-GLSSSKPISVIMIVLSI 241

Query: 251 LLLSSERYSRRRQK 264
           +L S  R  R  +K
Sbjct: 242 VLFSVFRLVRYNKK 255



 Score = 37.0 bits (84), Expect = 9e-07
 Identities = 56/264 (21%), Positives = 101/264 (38%), Gaps = 23/264 (8%)

Query: 281 KGWRLWAALIWCWGLVAVAFILPLLQLISYAWTYFAQSWTTQFKEYAINSFTVSISAAVV 340
           KG+ L   +I  + L+ V  +LPLL +I            ++     I S  VSI AA  
Sbjct: 5   KGFNLLFLVISLFLLLFV--LLPLLNMILNPGNVAGAIHDSE----VIKSLLVSIKAAST 58

Query: 341 AVLVALVANFYARLQNNRTSVALMRLSSMGYAVPGTVLAIGILVPVLALDHLINDIAKMM 400
           A  +A+             S  L R    G  V   ++ I + +P   +  +I       
Sbjct: 59  ATALAIFLGI-------PLSYLLARYHFTGKNVVEAIIDIPMAIPHSVIGIMILAFFYGT 111

Query: 401 EWGRP----GLVFSGSLFAIVFALVVRFSAVAIGSIESSLSKVSPSLDMAARTMGCHANQ 456
             GR     G     + + IV  ++       + S       V+  L+  +RT+G    +
Sbjct: 112 SIGRGIENIGFEIVDNFWGIVVVMLYVGLPYMVNSGRDGFLMVNEELENVSRTLGASKIK 171

Query: 457 MLKRVHLPLIRRGALIAGLLVFIESMKELNAAILLRPFNFETLATYV-----YNYASDER 511
               + LPLI+   +   +L F   + E+ A +++  F   T    +     Y  +S + 
Sbjct: 172 TFFNISLPLIKNNLVSGSILTFARGISEVGAILIVAYFPKTTPVLILDRFNEYGLSSSKP 231

Query: 512 LELAALPAILLVLVGLIPLVMVNR 535
           + +  +  + +VL  +  LV  N+
Sbjct: 232 ISVIMI-VLSIVLFSVFRLVRYNK 254