Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., iron ABC transporter permease from Methanococcus maripaludis JJ

 Score = 99.8 bits (247), Expect = 2e-25
 Identities = 120/551 (21%), Positives = 235/551 (42%), Gaps = 65/551 (11%)

Query: 11  SSLVLTTLLVLPILAIFYTAF-GNSDEVFAHLLATVMPTYIF----NTLVLTCSVLLLAL 65
           +++ L   ++ P+  +F  +F G++          +  +Y F    N++V+ C   ++++
Sbjct: 26  ANVFLLIFIMYPVFTVFLQSFYGSNGFTLDAYSKFISDSYYFGILKNSIVVACFSTIISI 85

Query: 66  LFGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGW 125
             G   + +I       + + + A+ LP+  P +I    +   F   G +   L    G 
Sbjct: 86  FLGFIFSIIIFKTDFKFKNFFKIAVFLPIITPGFISSLAYVFLFGRHGAVTYGL---LGL 142

Query: 126 QAGSYWFPDIRSLGGASVVLALVLYPYV-YLLCRAAFMEQNVTLLQSARLLKCSPWQSFR 184
           +   Y +  +       V++  + Y    + +  A  +  +     +AR L  + +Q F+
Sbjct: 143 EPNIYGWKSV-------VIMQSIDYTTTAFFIISAVLLGISGEFEDAARNLGSNEFQVFK 195

Query: 185 RISLPLARPAIAVGLSLVAMETIGDFGTVSLFA--VNTLTTAVYDTWLGYSNLNAAAKIS 242
           +++LPL  P I     L+ M+++ DFGT  +     NTL TA Y   +G  N   A+ +S
Sbjct: 196 KVTLPLLIPGILSAGLLIFMQSMADFGTPIIVGGNFNTLATASYFEIIGRYNTQMASTLS 255

Query: 243 AIMLVMVLLLLSSERYSRRRQKLYQTQFNSHEEYRYTLKGWRLWAALIWCWGLVAVAFIL 302
            I+L   + L            LY      +E  +  L  + L        G  A+ F +
Sbjct: 256 VILLFPSMALF----------YLYSKYHKGYELKKSKLTKYSLSNIQKIILGFPAIFFSI 305

Query: 303 PLLQLISYAWTYFAQSWTTQF-KEYA--INSFTVSISAAVVA------------VLVAL- 346
            L  L+ +A   F  S+T  F   YA  ++ F  +ISA  +A            +LVA  
Sbjct: 306 -LAYLLFFA--VFVASFTKSFGHNYALTLDYFFEAISAGQLAIKNTLFYALSSSILVAFL 362

Query: 347 -VANFYARLQNNRTSVALMRL-SSMGYAVPGTVLAIGILVPVLALDHLINDIAKMMEWGR 404
            VA  Y   +       LM L  ++ +A+PGT + +G L                + +  
Sbjct: 363 GVAYSYIIYRGKFFGRKLMDLVITLPFAIPGTFMGLGYL----------------LAFNN 406

Query: 405 PGLVFSGSLFAIVFALVVRFSAVAIGSIESSLSKVSPSLDMAARTMGCHANQMLKRVHLP 464
             L+ +G+   I+   +VR    +  +  S LS++  S++ A+  +G    +   +V LP
Sbjct: 407 YPLLLTGTSSIIILNCMVRKLPFSFKTGNSVLSQIEESVEEASLNLGASRLKTFYKVVLP 466

Query: 465 LIRRGALIAGLLVFIESMKELNAAILLRPFNFETLATYVYNYASDERLELAALPAILLVL 524
           L+    + + +  FI ++K L + I L   N + L+  V+    + +L + A  ++ +V+
Sbjct: 467 LLEPAIIFSMIYTFIATIKSLGSIIFLMTANTKVLSAMVFESTINRQLGVGACYSMFMVI 526

Query: 525 VGLIPLVMVNR 535
           + +I ++ + R
Sbjct: 527 LSIIGILGILR 537