Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., iron(III) ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  562 bits (1449), Expect = e-164
 Identities = 287/534 (53%), Positives = 383/534 (71%), Gaps = 1/534 (0%)

Query: 7   AWKASSLVLTTLLVLPILAIFYTAFGNSDEVFAHLLATVMPTYIFNTLVLTCSVLLLALL 66
           +W  +   +  LLVLP+LA+   A    + VF HLL+TV+PTYI N+L L   V + +LL
Sbjct: 8   SWSLTGYAIAVLLVLPLLALLLQAAQPDEAVFGHLLSTVLPTYIANSLWLILWVSIGSLL 67

Query: 67  FGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGWQ 126
             +P AWL+A C+  G R+LQWAL+LPLAMPAYI+ Y++T   DYAGP+Q +LR   GW 
Sbjct: 68  LALPCAWLMARCEFVGRRYLQWALLLPLAMPAYIVAYVYTDLLDYAGPVQRSLRALFGWS 127

Query: 127 AGS-YWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFRR 185
           +   Y+FPDIR+LGGA+ VL+LVL+PY+YLL R AFMEQ++ L  ++R++ CSPWQSF R
Sbjct: 128 SPQDYFFPDIRTLGGAACVLSLVLFPYIYLLARTAFMEQSLNLAHASRIMGCSPWQSFWR 187

Query: 186 ISLPLARPAIAVGLSLVAMETIGDFGTVSLFAVNTLTTAVYDTWLGYSNLNAAAKISAIM 245
           +SLP+ARPA+AVG++LVAMET  DF TV+ FAV TLTTAVYDTWLGY NL AAAK+SAI+
Sbjct: 188 LSLPMARPALAVGVALVAMETAADFATVNYFAVPTLTTAVYDTWLGYGNLTAAAKLSAII 247

Query: 246 LVMVLLLLSSERYSRRRQKLYQTQFNSHEEYRYTLKGWRLWAALIWCWGLVAVAFILPLL 305
           L++V  L+  ER++RR+Q+L+Q Q        Y L   +    L +C  L+ +AF+LP  
Sbjct: 248 LLVVFSLIGVERFARRKQQLFQKQSRIQAIDLYRLSPMQTLLGLGYCGMLLLLAFVLPSG 307

Query: 306 QLISYAWTYFAQSWTTQFKEYAINSFTVSISAAVVAVLVALVANFYARLQNNRTSVALMR 365
            L+SYA  YF QSW   F + ++NS T+++  ++V  ++ALV  F  R+    +     R
Sbjct: 308 ILLSYAINYFEQSWDPLFWQLSVNSLTLALITSLVCCVIALVLMFIRRVSPRSSDALPSR 367

Query: 366 LSSMGYAVPGTVLAIGILVPVLALDHLINDIAKMMEWGRPGLVFSGSLFAIVFALVVRFS 425
           L+S GYA+PGTVLAIG+LVP+  LD  INDIA  +    PGL+ +GS  A+VFA  VRF 
Sbjct: 368 LASTGYALPGTVLAIGVLVPLTLLDFAINDIADWLGMAGPGLLLTGSTVALVFAFCVRFV 427

Query: 426 AVAIGSIESSLSKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKEL 485
           A+AIGS+ESS  ++SPSLDM + T+G    ++L+RVHLPL+ +G     LLVFIESMKEL
Sbjct: 428 AIAIGSVESSYKRISPSLDMVSLTLGQSPRRLLQRVHLPLLTKGLFAGALLVFIESMKEL 487

Query: 486 NAAILLRPFNFETLATYVYNYASDERLELAALPAILLVLVGLIPLVMVNRSLEQ 539
            AA+LLRP  FE LATYV+ + SDE+LE  ALPAI++VLVGL+PL+ +NRSLEQ
Sbjct: 488 PAALLLRPIGFENLATYVFQFVSDEKLEHGALPAIVIVLVGLVPLIYLNRSLEQ 541