Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., molybdenum ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 80.9 bits (198), Expect = 5e-20
 Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 20/237 (8%)

Query: 42  LATVMPTYIFNT--LVLTCSVLLLALLF----GVPSAWLIAMCKLPGERWLQWALVLPLA 95
           LA ++P+ +     ++LT  V  LA  F    GV +AW +A     G   +     LPL 
Sbjct: 4   LAPILPSGVSLAAPVMLTLRVAGLATFFSFFAGVGAAWFVARGPFRGRGIIDALCALPLV 63

Query: 96  MPAYIIGYLFTHWFDYAGPIQIALRDWTGWQAGSYWFPDIRSLGGASVVLALVLYPYVYL 155
           +P  ++GY         G     +  W      +  F    S  GA V   +V++P +Y 
Sbjct: 64  LPPTVLGYYLILLVGRRG----LMGPWLAEAGINLMF----SWQGAVVAATVVVFPLIYK 115

Query: 156 LCRAAFMEQNVTLLQSARLLKCSPWQSFRRISLPLARPAIAVGLSLVAMETIGDFGTVSL 215
             RAA    + +L ++AR L  S W+ F R+SLPLA   I  G  L     +G+FG   +
Sbjct: 116 AARAALESVDHSLERAARTLGASEWKVFVRVSLPLAWRGIFAGTMLAFARGMGEFGATLM 175

Query: 216 FAVN------TLTTAVYDTWLGYSNLNAAAKISAIMLVMVLLLLSSERYSRRRQKLY 266
            A N      TL  A+YD +   ++  A   ++   ++ + +LL +ER +   ++++
Sbjct: 176 LAGNLPGRTQTLALAIYDAFQSGNDAQATLLVAVTSVLCMSVLLLAERLAHCGRRMW 232



 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 14/204 (6%)

Query: 333 VSISAAVVAVL-VALVANFYARLQNNRTSVALMRLSSMGYAVPGTVLAIGILVPVLALDH 391
           VS++A V+  L VA +A F++       +  + R    G  +   + A+ +++P   L +
Sbjct: 12  VSLAAPVMLTLRVAGLATFFSFFAGVGAAWFVARGPFRGRGIIDALCALPLVLPPTVLGY 71

Query: 392 ----LINDIAKMMEW---GRPGLVFSGSLFAIVFALVVRFSAVAIGSIESSLSKVSPSLD 444
               L+     M  W       L+FS    A+V A VV F  +   +  ++L  V  SL+
Sbjct: 72  YLILLVGRRGLMGPWLAEAGINLMFSWQ-GAVVAATVVVFPLI-YKAARAALESVDHSLE 129

Query: 445 MAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKELNAAILLR---PFNFETLAT 501
            AART+G    ++  RV LPL  RG     +L F   M E  A ++L    P   +TLA 
Sbjct: 130 RAARTLGASEWKVFVRVSLPLAWRGIFAGTMLAFARGMGEFGATLMLAGNLPGRTQTLAL 189

Query: 502 YVYN-YASDERLELAALPAILLVL 524
            +Y+ + S    +   L A+  VL
Sbjct: 190 AIYDAFQSGNDAQATLLVAVTSVL 213