Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  409 bits (1052), Expect = e-118
 Identities = 217/529 (41%), Positives = 325/529 (61%), Gaps = 1/529 (0%)

Query: 12  SLVLTTLLVLPILAIFYTAFGNSDEVFAHLLATVMPTYIFNTLVLTCSVLLLALLFGVPS 71
           +LVL  L +LP+LA+  TA     +  A L  TV+P Y   TL L   V     + G  +
Sbjct: 30  ALVLAALCLLPMLAVLITALSGGTDTLAQLADTVLPGYTGATLALVVLVGTGTFMIGTST 89

Query: 72  AWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGWQAGSYW 131
           AWLI+M + PG RWL+  LVLPLA PAY++ Y +TH  D+ G +Q  LR   GW    YW
Sbjct: 90  AWLISMYEFPGRRWLEVLLVLPLAFPAYVLAYAYTHVLDHPGIVQATLRSVMGWGPRDYW 149

Query: 132 FPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFRRISLPLA 191
           FP+IRSLGGA+ +L LVLYPYVYLL RAAF++Q+ T   +AR L  +P+++F  +S+P+A
Sbjct: 150 FPEIRSLGGAAAMLILVLYPYVYLLARAAFVQQSATTFFAARALGRTPFRAFLEVSMPMA 209

Query: 192 RPAIAVGLSLVAMETIGDFGTVSLFAVNTLTTAVYDTWLGYSNLNAAAKISAIMLVMVLL 251
           RPAIA G+ L  METI DFGTVS F V+T  T +Y +W    +  AA++++  +L   LL
Sbjct: 210 RPAIAAGVLLATMETIADFGTVSYFGVHTFATGIYTSWFNMGDRVAASQLALGLLGFALL 269

Query: 252 LLSSERYSRRRQKLYQTQFNSHEEYRYTLKGWRLWAALIWCWGLVAVAFILPLLQLISYA 311
           L   ER SR   K Y          R TL GW  W+A I C   V +   +P++ L+   
Sbjct: 270 LAVLERQSRGSAK-YHGGKRQEAMPRTTLTGWHRWSATILCGAPVLLGVAIPIVTLLVMG 328

Query: 312 WTYFAQSWTTQFKEYAINSFTVSISAAVVAVLVALVANFYARLQNNRTSVALMRLSSMGY 371
                   + ++  +  NS T++ +AAV+ V  A++  +Y R++    S A + ++ +GY
Sbjct: 329 IGSEQNLLSRRYIRFITNSLTLASAAAVLTVCAAVILGYYQRVRPGPRSDAALYIARLGY 388

Query: 372 AVPGTVLAIGILVPVLALDHLINDIAKMMEWGRPGLVFSGSLFAIVFALVVRFSAVAIGS 431
           A+PG V+A+G+LVP    D+ ++   +       GL+ +GS++ +V A ++RF A A+G+
Sbjct: 389 AIPGGVIAVGLLVPFALFDNTLDAWMRANFDLSTGLLLTGSIWLLVGAYMIRFLAAALGA 448

Query: 432 IESSLSKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKELNAAILL 491
            E   + ++ +LD AAR +G  A   L+RVHLP++    L A L+VF++ MKEL A +++
Sbjct: 449 YEGGQATINLNLDYAARVLGQTAYGTLRRVHLPILTPSLLTALLIVFVDVMKELPATLIM 508

Query: 492 RPFNFETLATYVYNYASDERLELAALPAILLVLVGLIPLVMVNRSLEQK 540
           RPFN++TLA   Y  ASDERLE AA+P++L+V VGL+P++++ R + ++
Sbjct: 509 RPFNYDTLAVQAYRLASDERLEGAAVPSLLIVAVGLLPVILLCRQVRRQ 557