Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella sp. ANA-3

 Score =  553 bits (1425), Expect = e-162
 Identities = 281/534 (52%), Positives = 381/534 (71%), Gaps = 1/534 (0%)

Query: 7   AWKASSLVLTTLLVLPILAIFYTAFGNSDEVFAHLLATVMPTYIFNTLVLTCSVLLLALL 66
           +W  +   +  LLVLP+ A+   A    + VF HLL+TV+PTYI N+L L   V + +LL
Sbjct: 8   SWSLTGYAIAALLVLPLFALILQAAQPDEAVFGHLLSTVLPTYISNSLWLILWVSIGSLL 67

Query: 67  FGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGWQ 126
             +P AWL+A C+    R+LQWAL+LPLAMPAYI+ Y++T   DYAGP+Q  LR   GW 
Sbjct: 68  LALPCAWLMARCEFVARRYLQWALLLPLAMPAYIVAYVYTDLLDYAGPVQTWLRSVFGWS 127

Query: 127 AGS-YWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFRR 185
           +   Y+FPDIR+LGGA+ VL+LVL+PY+YLL R AFMEQ+++L  ++R++ CSPWQSF R
Sbjct: 128 SPQDYFFPDIRTLGGAACVLSLVLFPYIYLLARTAFMEQSLSLAHASRIMGCSPWQSFWR 187

Query: 186 ISLPLARPAIAVGLSLVAMETIGDFGTVSLFAVNTLTTAVYDTWLGYSNLNAAAKISAIM 245
           +SLP+ARPA+AVG++LVAMET  DF TV+ FAV TLTTAVYDTWLGY NL AAAK+SAI+
Sbjct: 188 LSLPMARPALAVGVALVAMETAADFATVNYFAVPTLTTAVYDTWLGYGNLTAAAKLSAII 247

Query: 246 LVMVLLLLSSERYSRRRQKLYQTQFNSHEEYRYTLKGWRLWAALIWCWGLVAVAFILPLL 305
           L++V  L+  ER++RR+Q+L+Q Q        Y L   +   AL +C  L+ +AFILP  
Sbjct: 248 LLVVFSLIGVERFARRKQQLFQKQSRIQASDLYRLSPLQTLLALGYCITLLLLAFILPSG 307

Query: 306 QLISYAWTYFAQSWTTQFKEYAINSFTVSISAAVVAVLVALVANFYARLQNNRTSVALMR 365
            L+SYA  YF QSW   F + ++NS ++++  ++V   +AL+  F  R+    +     R
Sbjct: 308 ILLSYAIDYFEQSWDPIFWQLSMNSLSLALITSLVCCAIALILMFIRRVSPRSSDALPSR 367

Query: 366 LSSMGYAVPGTVLAIGILVPVLALDHLINDIAKMMEWGRPGLVFSGSLFAIVFALVVRFS 425
           L+S GYA+PGTVLAIG+LVP+  LD  IND+A  +    PGL+ +GS  A+VFA  VRF 
Sbjct: 368 LASTGYALPGTVLAIGVLVPLTLLDFAINDVADWLGMTGPGLLLTGSTVALVFAFCVRFV 427

Query: 426 AVAIGSIESSLSKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKEL 485
           A+AIGS+E+S  ++SPSLDM + T+G    ++L+RVHLPL+ +G     LLVFIESMKEL
Sbjct: 428 AIAIGSVETSYKRISPSLDMVSLTLGQSPRRLLQRVHLPLLTKGLFAGALLVFIESMKEL 487

Query: 486 NAAILLRPFNFETLATYVYNYASDERLELAALPAILLVLVGLIPLVMVNRSLEQ 539
            AA++LRP  FE LATYV+ + SDE+LE  ALPAI++V+VGL+PL+ +NRSLEQ
Sbjct: 488 PAALMLRPIGFENLATYVFQFVSDEKLEHGALPAIVIVIVGLVPLIYLNRSLEQ 541