Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., molybdate ABC transporter permease protein (RefSeq) from Shewanella sp. ANA-3

 Score = 85.5 bits (210), Expect = 2e-21
 Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 14/231 (6%)

Query: 41  LLATVMPTYIFNTLVLTCSVLLLALLFGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYI 100
           LL+      +  +L ++   +L +L  G+  AWL+A  + PG+      L LPL +P  +
Sbjct: 16  LLSEYETAALLLSLKVSAVAVLASLPLGILCAWLLARVEFPGKAIFDSLLHLPLVLPPVV 75

Query: 101 IGYLFTHWFDYAGPIQIALRDWTGWQAGSYWFPDIRSLGGASVVLALVLYPYVYLLCRAA 160
           +GYL        G I   L +W G      W        GA++  A+V +P +    R +
Sbjct: 76  VGYLLLISMGRQGVIGQWLYNWFGVSFSFSW-------RGAALAAAVVSFPLMVRAIRQS 128

Query: 161 FMEQNVTLLQSARLLKCSPWQSFRRISLPLARPAIAVGLSLVAMETIGDFGTVSLFAVN- 219
           F   ++ L Q+AR L  S W+ F  I+LPL  P I  G+ +    ++G+FG+   F  N 
Sbjct: 129 FETVDIRLEQAARTLGSSRWRVFLTITLPLTSPGIVSGMIIAFARSLGEFGSTITFVSNI 188

Query: 220 -----TLTTAVYDTWLGYSNLNAAAKISAIMLVMVLL-LLSSERYSRRRQK 264
                T+  A+Y           A ++  I +V+ L  LL+S+  +++  K
Sbjct: 189 PGETRTIPLAMYSFIETPGAEYQAMRLCIISIVIALASLLASQWLTKKALK 239



 Score = 48.5 bits (114), Expect = 3e-10
 Identities = 48/230 (20%), Positives = 102/230 (44%), Gaps = 26/230 (11%)

Query: 325 EYAINSFTVSISAAVVAVLVALVANFYARLQNNRTSVALMRLSSMGYAVPGTVLAIGILV 384
           EY   +  +S+  + VAVL +L             +  L R+   G A+  ++L + +++
Sbjct: 19  EYETAALLLSLKVSAVAVLASLPLGILC-------AWLLARVEFPGKAIFDSLLHLPLVL 71

Query: 385 PVLALDHLINDIAKMMEWGRPGLV--FSGSLFAIVFALVVRFSAVA---------IGSIE 433
           P + + +L+     ++  GR G++  +  + F + F+   R +A+A         + +I 
Sbjct: 72  PPVVVGYLL-----LISMGRQGVIGQWLYNWFGVSFSFSWRGAALAAAVVSFPLMVRAIR 126

Query: 434 SSLSKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKELNAAILL-- 491
            S   V   L+ AART+G    ++   + LPL   G +   ++ F  S+ E  + I    
Sbjct: 127 QSFETVDIRLEQAARTLGSSRWRVFLTITLPLTSPGIVSGMIIAFARSLGEFGSTITFVS 186

Query: 492 -RPFNFETLATYVYNYASDERLELAALPAILLVLVGLIPLVMVNRSLEQK 540
             P    T+   +Y++      E  A+   ++ +V  +  ++ ++ L +K
Sbjct: 187 NIPGETRTIPLAMYSFIETPGAEYQAMRLCIISIVIALASLLASQWLTKK 236