Pairwise Alignments

Query, 337 a.a., iron ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., iron(III) ABC transporter, periplasmic iron(III)-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  434 bits (1117), Expect = e-126
 Identities = 212/337 (62%), Positives = 266/337 (78%), Gaps = 2/337 (0%)

Query: 1   MKKLLSLSAITLSVLAPSAFAAQEVNVYSYRQPFLIEPMFAEFTKETGIKVNVKFAKEGI 60
           MK +   + I L  +A SA A +++ VYSYRQ FL+EP+   FT+ETGI VNV FAK+GI
Sbjct: 1   MKWVTCAALIGLMSVAQSAHADEKLTVYSYRQAFLVEPILKRFTEETGIGVNVVFAKDGI 60

Query: 61  AEKLAQEGEYSPADVILTSEFSRLFELTEKGLTQPLDSKVIEENIPAQYRDSGDEWFALT 120
           AE++A+EG  SPAD++LTS+FSRL EL EK LT P+ S  ++ NIPAQYRD   +W+ALT
Sbjct: 61  AERIAREGRLSPADLVLTSDFSRLVELVEKDLTSPVQSAQLDNNIPAQYRDPEGQWYALT 120

Query: 121 QRTRSVYSSRDRLGKLGDDFDYMDLAKPEFKGKICTRSGKHPYNIALVASIIANHGEAEA 180
            R R++Y+++DRLG       Y +LA P++KGKICTRSGKHPYNIALVAS+IA+HGEA+ 
Sbjct: 121 MRVRNIYTAKDRLGPQA--IRYEELADPKYKGKICTRSGKHPYNIALVASMIAHHGEADT 178

Query: 181 KAWLEGVKANLARKPQGNDRDQVRAIKEGLCDVSLGNSYYLGAMLNDQEQKSWAEAVYIN 240
           K WL+GVK NLARKPQGNDR QV+A+KEGLCD+++GNSYY G ML D EQ SWAEAV IN
Sbjct: 179 KTWLQGVKTNLARKPQGNDRGQVQAVKEGLCDIAIGNSYYYGNMLQDPEQMSWAEAVVIN 238

Query: 241 FPGQNVQGTHVNVSGMAMAKYSPNRENAQKLMEFLTGETAQKMYAEVNYEYPVKPGVQRS 300
           FP Q  +G HVNVSGM +A+++PN++NA KLMEFL+G+ AQK YAEVN EYPVK  V  S
Sbjct: 239 FPNQADRGAHVNVSGMVLARHAPNKDNAIKLMEFLSGDVAQKAYAEVNMEYPVKADVAPS 298

Query: 301 ALVESWGEFKADSLPLEKIADNNAAAIKLIDEVKFDL 337
            LV SWGEFKAD LP+ K+A+ + AA+KL+DEV+FDL
Sbjct: 299 TLVASWGEFKADQLPIFKLAEYHQAAVKLLDEVQFDL 335