Pairwise Alignments

Query, 337 a.a., iron ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., extracellular solute-binding protein family 1 (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  208 bits (530), Expect = 1e-58
 Identities = 122/333 (36%), Positives = 187/333 (56%), Gaps = 10/333 (3%)

Query: 5   LSLSAITLS--VLAPSAFAAQEVNVYSYRQPFLIEPMFAEFTKETGIKVN-VKFAKEGIA 61
           L L+ +T +  +L   A+AA E+N+YS R     E ++++F + TGI VN ++   + + 
Sbjct: 7   LPLAGLTAAATLLGSVAYAAGELNLYSSRHYDTDERLYSDFEEATGITVNRIEGNADELI 66

Query: 62  EKLAQEGEYSPADVILTSEFSRLFELTEKGLTQPLDSKVIEENIPAQYRDSGDEWFALTQ 121
            ++  EG  SPADV LT +  RL    + GL Q +DS ++E  IPA  +D  ++WF  +Q
Sbjct: 67  ARMEAEGANSPADVFLTVDTVRLARAKDLGLLQSVDSPILEGRIPAYLQDDDNQWFGFSQ 126

Query: 122 RTRSVYSSRDRLGKLGDDFDYMDLAKPEFKGKICTRSGKHPYNIALVASIIANHGEAEAK 181
           R R ++   D+         Y DLAKPE++G +C RS  + Y   +VA++I + GE    
Sbjct: 127 RARILFY--DKTDVENPPATYQDLAKPEYEGMVCIRSSTNVYTQNIVAALIEHLGEEAVT 184

Query: 182 AWLEGVKANLARKPQGNDRDQVRAIKEGLCDVSLGNSYYLGAMLNDQEQKSWAEAVYIN- 240
            W + V  N AR PQG D DQ+R I  G CD+++ N+YY  A    +   + +E    N 
Sbjct: 185 DWAKAVVGNFARAPQGGDTDQLRGIASGECDIAMSNTYYY-ARATRKGDSTMSEEDLANI 243

Query: 241 ---FPGQNVQGTHVNVSGMAMAKYSPNRENAQKLMEFLTGETAQKMYAEVNYEYPVKPGV 297
              FP QN  G H+N+SG  +A  +PNR+NA K +E+L+   AQ+ ++  N EYP  PGV
Sbjct: 244 GWVFPNQNSIGAHMNISGGGVAANAPNRDNAVKFLEYLSSVQAQEYFSAGNDEYPAVPGV 303

Query: 298 QRSALVESWGEFKADSLPLEKIADNNAAAIKLI 330
             S  V + G F+ D + L  I +N  AA +++
Sbjct: 304 GLSPSVAALGIFRPDVIDLSAIGNNVDAAQRVL 336