Pairwise Alignments

Query, 337 a.a., iron ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., extracellular solute-binding protein (RefSeq) from Shewanella sp. ANA-3

 Score =  428 bits (1101), Expect = e-125
 Identities = 208/337 (61%), Positives = 263/337 (78%), Gaps = 2/337 (0%)

Query: 1   MKKLLSLSAITLSVLAPSAFAAQEVNVYSYRQPFLIEPMFAEFTKETGIKVNVKFAKEGI 60
           MK +   + + L  +A SA A +++ VYSYRQ FL+EP+   FT ETGI VNV FAK+GI
Sbjct: 1   MKWVTCAALLGLMSVAQSAHADEKLTVYSYRQAFLVEPILKRFTDETGIAVNVVFAKDGI 60

Query: 61  AEKLAQEGEYSPADVILTSEFSRLFELTEKGLTQPLDSKVIEENIPAQYRDSGDEWFALT 120
           AE++A+EG  SPAD++LTS+FSRL EL +K LT P+ S  +  NIPAQYRD   +W+ALT
Sbjct: 61  AERIAREGRLSPADLVLTSDFSRLVELVDKDLTSPVKSDQLNSNIPAQYRDPDGQWYALT 120

Query: 121 QRTRSVYSSRDRLGKLGDDFDYMDLAKPEFKGKICTRSGKHPYNIALVASIIANHGEAEA 180
            R R++Y+++DRLG       Y +LA P++KGKICTRSGKHPYNIALVAS+IA+HGEA+ 
Sbjct: 121 MRVRNLYTAKDRLGPQA--ISYEELADPKYKGKICTRSGKHPYNIALVASMIAHHGEADT 178

Query: 181 KAWLEGVKANLARKPQGNDRDQVRAIKEGLCDVSLGNSYYLGAMLNDQEQKSWAEAVYIN 240
           K WL+GVK NLARKPQGNDR QV+A+KEGLCD+++GNSYY G ML D EQKSWAEAV IN
Sbjct: 179 KTWLQGVKTNLARKPQGNDRAQVKAVKEGLCDIAIGNSYYYGNMLQDPEQKSWAEAVAIN 238

Query: 241 FPGQNVQGTHVNVSGMAMAKYSPNRENAQKLMEFLTGETAQKMYAEVNYEYPVKPGVQRS 300
           FP Q  +G HVNVSGM + +++PN++NA KLMEFL+ + AQK YAEVN EYPVK  V  S
Sbjct: 239 FPNQADRGAHVNVSGMVLTRHAPNKDNAIKLMEFLSADVAQKAYAEVNMEYPVKADVAPS 298

Query: 301 ALVESWGEFKADSLPLEKIADNNAAAIKLIDEVKFDL 337
            LV SWGEFK+D LP+ K+A+ + AA+KL+DEV+FDL
Sbjct: 299 TLVASWGEFKSDQLPIFKLAEYHQAAVKLLDEVQFDL 335