Pairwise Alignments

Query, 409 a.a., ammonium transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., ammonia channel from Phaeobacter inhibens DSM 17395

 Score =  174 bits (441), Expect = 4e-48
 Identities = 126/402 (31%), Positives = 192/402 (47%), Gaps = 27/402 (6%)

Query: 13  ALDTFFFLISGALVMWMAA-GFAMLEAGLVRSKNTTEILTKNFVLYAIACTTYLIVGYNI 71
           A DT + +++ ALV++M   G A+   GLVR++N   +  + + +  +    +L  GY+I
Sbjct: 3   AADTAWIIVATALVLFMTLPGLALFYGGLVRARNVLSVFMQCYAIACLMSVLWLAFGYSI 62

Query: 72  MYVDNTEGGW--LPSFGALIGSQADGADHSLESDFFF--QVVFVATAMSVVSGAVAERMK 127
            +   T G W  L     L G  AD    +L    FF  Q+ F     +++ GA  ER+ 
Sbjct: 63  AFGSGTSGVWGGLDKM-FLSGVTADSLSGTLPEVLFFAFQMTFAIITPALIVGAYVERVG 121

Query: 128 LWAFLIFSAVLTAFIYPVEGYWTWGGGFLS------AAGFSDFAGSGIVHLAGASAALAG 181
               L+FS +     Y    +W WGGG L+        G  DFAG  +VH     AAL  
Sbjct: 122 FGFVLVFSGLWMLLCYAPVVHWIWGGGMLADGGIFGEVGVRDFAGGIVVHETAGLAALII 181

Query: 182 VLLLGARKGKYGKNGEIYPIPGSNMPLATLGTFILWFGWFGFNGGSQLMVSDFENATSVG 241
            + LG RK +          P  N     +G  +LW GWFGFNGGSQL            
Sbjct: 182 AVFLGPRKNR--------TTPPHNPGYVFIGAAMLWVGWFGFNGGSQLAADG-----GAA 228

Query: 242 KIFLNTNAAAAAGAIAALLVCKTTWGKADLTMVLNGALAGLVAITADPLSPSPLYSVAIG 301
                T+ +AA  ++   L  K  +GKA +  ++ G +AGL +IT       P+ ++ IG
Sbjct: 229 MALTVTHISAATASLTWALWEKIKYGKASMVGLVTGTIAGLASITPASGFVGPVEALVIG 288

Query: 302 AVSGSLVVFSI-IGLDKLKIDDPVGAISVHGVCGFFGLMVVPLSNADATFGAQLLGAAVI 360
           AV+G L   ++ +  + LKIDD +   +VHGV G FG +++ +  A + F AQ+ G  V+
Sbjct: 289 AVAGILCQEAVNVVRNLLKIDDTLDVFAVHGVGGIFGTIMIAVFGAGSWF-AQVGGLVVV 347

Query: 361 FAWVFGASLVVWGVLKATMGIRVSEEEEMEGMDMHDCGVGAY 402
             +    ++V+  V  A   +RV  E E  G+D+   G  AY
Sbjct: 348 GVFTAVVTVVLVKVTAAITPLRVDLETETNGLDITVHGERAY 389