Pairwise Alignments

Query, 409 a.a., ammonium transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 477 a.a., Probable ammonium-transport integral membrane protein Amt from Mycobacterium tuberculosis H37Rv

 Score =  166 bits (420), Expect = 1e-45
 Identities = 128/432 (29%), Positives = 196/432 (45%), Gaps = 66/432 (15%)

Query: 15  DTFFFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNFVLYAIACTTYLIVGYNIMYV 74
           DT + L+S ALV+ M  G A    G+VRSK+   ++  +     +    + + GY+I + 
Sbjct: 14  DTAWMLVSSALVLLMTPGLAFFYGGMVRSKSVLNMIMMSISAMGVVTVLWALYGYSIAFG 73

Query: 75  D---NTEGGWLPSFG--ALIGSQADGADHSLESDFF---------------FQVVFVATA 114
           D   N  G     +G   LIG  A  AD S ++                  FQ++F    
Sbjct: 74  DDVGNIAGNPSQYWGLKGLIGVNAVAADPSTQTAAVNIPLAGTLPATVFVAFQLMFAIIT 133

Query: 115 MSVVSGAVAERMKLWAFLIFSAVLTAFIYPVEGYWTW---------GGGFLSAAGFSDFA 165
           ++++SGAVA+R+K  A+L+F+ +   F+Y    +W +         GG   +     DFA
Sbjct: 134 VALISGAVADRLKFGAWLLFAGLWATFVYFPVAHWVFAFDGFAAEHGGWIANKLHAIDFA 193

Query: 166 GSGIVHLAGASAALAGVLLLGARKGKYGKNGEIYPIP---GSNMPLATLGTFILWFGWFG 222
           G   VH+    AAL   ++LG R+G        +P       N+P   LG  +LWFGW+G
Sbjct: 194 GGTAVHINAGVAALMLAIVLGKRRG--------WPATLFRPHNLPFVMLGAALLWFGWYG 245

Query: 223 FNGGSQLMVSDFENATSVGKIFLNTNAAAAAGAIAALLVCKTTWGKADLTMVLNGALAGL 282
           FN GS    +    AT     F+ T  A AA  +  LL  +   GKA      +G +AGL
Sbjct: 246 FNAGSATTANGVAGAT-----FVTTTIATAAAMLGWLLTERVRDGKATTLGAASGIVAGL 300

Query: 283 VAITADPLSPSPLYSVAIGAVSGSLVVFSIIGLDKLKIDDPVGAISVHGVCGFFGLMVVP 342
           VAIT    S + L ++A+G  +G L   ++    KL  DD +  + VH V G  G ++V 
Sbjct: 301 VAITPSCSSVNVLGALAVGVSAGVLCALAVGLKFKLGFDDSLDVVGVHLVGGLVGTLLVG 360

Query: 343 LSNAD---------------------ATFGAQLLGAAVIFAWVFGASLVVWGVLKATMGI 381
           L  A                      A    Q LGA  +  +    +L++  +LK T+G+
Sbjct: 361 LLAAPEAPAINGVAGVSKGLFYGGGFAQLERQALGACSVLVYSGIITLILALILKFTIGL 420

Query: 382 RVSEEEEMEGMD 393
           R+  E+E  G+D
Sbjct: 421 RLDAEQESTGID 432