Pairwise Alignments

Query, 409 a.a., ammonium transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., ammonium transporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  658 bits (1698), Expect = 0.0
 Identities = 322/405 (79%), Positives = 357/405 (88%)

Query: 5   ITVTELRYALDTFFFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNFVLYAIACTTY 64
           +TV+ELR+ALDTF+FLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKN VLYAIAC  Y
Sbjct: 1   MTVSELRFALDTFYFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNVVLYAIACVMY 60

Query: 65  LIVGYNIMYVDNTEGGWLPSFGALIGSQADGADHSLESDFFFQVVFVATAMSVVSGAVAE 124
           L+VGYNIMYVDN EGGWLPSFG LIGSQA  A+H+LESDFFFQVVFVATAMS+VSGAVAE
Sbjct: 61  LLVGYNIMYVDNAEGGWLPSFGTLIGSQAADANHALESDFFFQVVFVATAMSIVSGAVAE 120

Query: 125 RMKLWAFLIFSAVLTAFIYPVEGYWTWGGGFLSAAGFSDFAGSGIVHLAGASAALAGVLL 184
           RMKLWAFL+FS V+T  IYPVEGYWTWG GF+++ GF DFAGSGIVH+ GA+AA+AGVLL
Sbjct: 121 RMKLWAFLVFSVVMTGIIYPVEGYWTWGKGFIASLGFVDFAGSGIVHMTGAAAAIAGVLL 180

Query: 185 LGARKGKYGKNGEIYPIPGSNMPLATLGTFILWFGWFGFNGGSQLMVSDFENATSVGKIF 244
           LGARKGKYG NG++ PIPGSN+P+ATLG FILW GWFGFNGGSQLMVSD  NA++V K+F
Sbjct: 181 LGARKGKYGPNGQVNPIPGSNLPMATLGMFILWMGWFGFNGGSQLMVSDAANASAVAKVF 240

Query: 245 LNTNAAAAAGAIAALLVCKTTWGKADLTMVLNGALAGLVAITADPLSPSPLYSVAIGAVS 304
           +NTN AAA GAI+AL+VCK  WGKADLTM+LNG LAGLVAITADPLSPS L +  IG V+
Sbjct: 241 VNTNTAAALGAISALIVCKMIWGKADLTMILNGILAGLVAITADPLSPSLLMAGVIGLVA 300

Query: 305 GSLVVFSIIGLDKLKIDDPVGAISVHGVCGFFGLMVVPLSNADATFGAQLLGAAVIFAWV 364
           G LVVFSI+GLD++KIDDPVGAISVHGV GF GLM VPLSNA+AT  AQL GAA+IFAWV
Sbjct: 301 GGLVVFSIVGLDRIKIDDPVGAISVHGVAGFLGLMCVPLSNANATITAQLTGAAIIFAWV 360

Query: 365 FGASLVVWGVLKATMGIRVSEEEEMEGMDMHDCGVGAYPEFVTVK 409
           F AS  VW VLK TMGIRVSEEEE  GMD  DCG+ AYPEFVTVK
Sbjct: 361 FSASFAVWFVLKMTMGIRVSEEEEYNGMDASDCGIDAYPEFVTVK 405