Pairwise Alignments

Query, 409 a.a., ammonium transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., ammonium transporter (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  207 bits (527), Expect = 4e-58
 Identities = 137/410 (33%), Positives = 199/410 (48%), Gaps = 28/410 (6%)

Query: 13  ALDTFFFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNFVLYAIACTTYLIVGYNIM 72
           A DT F LI  ALVM M  G A+   GLVR+KN       +FVL  +A   + I+GY + 
Sbjct: 3   AADTAFILICAALVMLMTPGLALFYGGLVRAKNVLSTTMHSFVLVGVASVVWAIIGYTLA 62

Query: 73  Y---VDNTEGGWLPSFGALIGSQADGADHSLESDFF--FQVVFVATAMSVVSGAVAERMK 127
           +   V    GG    F   +G +   A  ++    F  FQ +F     +++SGA AER+ 
Sbjct: 63  FGPDVAGVIGGLDHLFLKGVGMEPSEAAKTIPHLAFMVFQCMFAVITPALISGAYAERIS 122

Query: 128 LWAFLIFSAVLTAFIYPVEGYWTWGGGFLSAAGFSDFAGSGIVHLAGASAALAGVLLLGA 187
             A L+FS +    +Y    +W WGGG++   G  DFAG  +VH++ A+AALA   +LG 
Sbjct: 123 FRAMLLFSVLWLVLVYAPMAHWVWGGGWMFKMGALDFAGGAVVHMSSAAAALAAAHVLGR 182

Query: 188 RKGKYGKNGEIYPIPGSNMPLATLGTFILWFGWFGFNGGSQLMVSDFENATSVGKIFLNT 247
           R+G YG+     P    N+P+  LG  ILWFGWFGFN GS L  +           F+ T
Sbjct: 183 REG-YGRE----PFVPHNLPMTVLGAGILWFGWFGFNAGSALAANGL-----AAMAFVTT 232

Query: 248 NAAAAAGAIAALLVCKTTWGKADLTMVLNGALAGLVAITADPLSPSPLYSVAIGAVSGSL 307
           + A AAG +  L V     GK       +GA+AGLVAIT       P+ ++ IG   G L
Sbjct: 233 HLATAAGVMGWLAVEWMHSGKPTTLGAASGAVAGLVAITPAAGFVEPMPAMIIGFGGGML 292

Query: 308 VVFSIIGLDKLKIDDPVGAISVHGVCGFFGLMVVPLSNADATFG-------------AQL 354
               ++     K DD +  + VHGV G +G +   L  ++A  G              Q 
Sbjct: 293 CYGGVLMKKVFKYDDALDVVGVHGVGGTWGALATGLFASEAVNGVNGLFYGNPGQLWTQF 352

Query: 355 LGAAVIFAWVFGASLVVWGVLKATMGIRVSEEEEMEGMDMHDCGVGAYPE 404
           L     + + +  S  ++  + A MG+RV+ + E  G+D+ +    AY +
Sbjct: 353 LSVVATWLFCYLMSRGIFHAVDALMGLRVTVDAERAGLDVSEHNERAYEQ 402