Pairwise Alignments

Query, 409 a.a., ammonium transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., ammonium transporter (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  410 bits (1053), Expect = e-119
 Identities = 217/401 (54%), Positives = 278/401 (69%), Gaps = 8/401 (1%)

Query: 12  YALDTFFFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNFVLYAIACTTYLIVGYNI 71
           Y + T  F ++G LV +MA GFAMLE GLVRSKN T  +TKN  LY+IA   Y ++G+N+
Sbjct: 35  YIMTTLLFCMAGFLVFFMACGFAMLEGGLVRSKNVTMQMTKNIALYSIAAVMYWLIGFNL 94

Query: 72  MYVDNTEGG----WLPSFGALIG-SQADGA-DH-SLESDFFFQVVFVATAMSVVSGAVAE 124
           MY  +  G     ++P+    +G + AD A D+ S+ SDFFFQ+VFVA   S+VSGA+AE
Sbjct: 95  MYPGDFNGYVGSFFVPTVLDPVGVAAADAALDYASIGSDFFFQLVFVAATASIVSGALAE 154

Query: 125 RMKLWAFLIFSAVLTAFIYPVEGYWTWGGGFLSAAGFSDFAGSGIVHLAGASAALAGVLL 184
           R+KLW FL F  VLT  +YP+ G W WGGG+LS  GFSDFAGS +VH  G  AALAG ++
Sbjct: 155 RIKLWPFLAFVVVLTGIMYPISGSWQWGGGWLSEMGFSDFAGSTVVHSVGGWAALAGAII 214

Query: 185 LGARKGKYGKNGEIYPIPGSNMPLATLGTFILWFGWFGFNGGSQLMVSDFENATSVGKIF 244
           LG R GKY K+G + P+PGSN+ LATLGTFILW GWFGFNGGSQL +    + + V +IF
Sbjct: 215 LGPRLGKY-KDGRVNPMPGSNLALATLGTFILWLGWFGFNGGSQLAMGTVGDVSDVSRIF 273

Query: 245 LNTNAAAAAGAIAALLVCKTTWGKADLTMVLNGALAGLVAITADPLSPSPLYSVAIGAVS 304
            NTN AAAAGA+ AL++ +  + K DLTMVLNGALAGLV+ITA PL P+   ++ IGAV 
Sbjct: 274 ANTNMAAAAGALTALILTQVLYKKPDLTMVLNGALAGLVSITASPLDPTLFGALWIGAVG 333

Query: 305 GSLVVFSIIGLDKLKIDDPVGAISVHGVCGFFGLMVVPLSNADATFGAQLLGAAVIFAWV 364
           G +VVF++  LDK KIDD VGAI VH   G +G + V      A+   QL+G A    + 
Sbjct: 334 GVIVVFTVPLLDKFKIDDVVGAIPVHLFAGIWGTIAVVFYQEGASLVTQLVGIAAYGVFT 393

Query: 365 FGASLVVWGVLKATMGIRVSEEEEMEGMDMHDCGVGAYPEF 405
           FG  L+VW +LK TMGIRVSEE+E+ G+D  + G+ AYP+F
Sbjct: 394 FGVGLIVWYLLKLTMGIRVSEEDEINGLDTSELGMEAYPDF 434