Pairwise Alignments

Query, 409 a.a., ammonium transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., ammonium transporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  320 bits (819), Expect = 8e-92
 Identities = 184/419 (43%), Positives = 247/419 (58%), Gaps = 26/419 (6%)

Query: 6   TVTELRYALDTFFFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNFVLYAIACTTYL 65
           T+ EL   L+T + L++  LV +M  GFA++EAG  R KNT  IL KNFV +      Y 
Sbjct: 70  TIGELALGLNTVWMLLAAMLVFFMQPGFALVEAGFTRVKNTANILMKNFVDFMFGSLLYW 129

Query: 66  IVGYNIMYVDNTEGGWLPSFGALIGSQADGADHSLESDFFFQVVFVATAMSVVSGAVAER 125
            +G+ +M+      G +P F  L  S  D +D   E    FQ VF ATA ++VSGA+AER
Sbjct: 130 FIGFGLMFGAGGLIG-MPHFFDL--SFLD-SDLPREGFLVFQTVFCATAATIVSGAMAER 185

Query: 126 MKLWAFLIFSAVLTAFIYPVEGYWTWGGGFLS------------AAGFSDFAGSGIVHLA 173
            K   +L+++  ++  IYP+ G+WTWGGG+L                F DFAGS IVH  
Sbjct: 186 TKFSMYLVYTIFISVLIYPISGHWTWGGGWLMNGEEGSFMMNLFGTTFHDFAGSTIVHSV 245

Query: 174 GASAALAGVLLLGARKGKYGKNGEIYPIPGSNMPLATLGTFILWFGWFGFNGGSQLMVSD 233
           G   AL G  +LG R GKYGK+G+   IPG N+ +A LG FILWFGWFGFN GSQL  S 
Sbjct: 246 GGWIALVGAAILGPRIGKYGKDGKSRAIPGHNLTVAALGVFILWFGWFGFNPGSQLAAST 305

Query: 234 FENATSVGKIFLNTNAAAAAGAIAALLVCKTTWGKADLTMVLNGALAGLVAITADPLSPS 293
             +A ++  +FL TN AA AG   AL +    +GK  L++ LNG LAGLV ITA   + +
Sbjct: 306 EADAMAISHVFLTTNLAACAGGFFALAMSWMKYGKPSLSLTLNGVLAGLVGITAGCDAVA 365

Query: 294 PLYSVAIGAVSGSLVVFSIIGLDK-LKIDDPVGAISVHGVCGFFGLMVVPL-SNADATF- 350
           P  +V IGA+ G +++F++  +DK LKIDDPVGA SVHGVCGF G ++  L S ++  F 
Sbjct: 366 PSGAVLIGAICGVVMIFAVDFIDKVLKIDDPVGASSVHGVCGFLGTVLTGLFSTSEGLFY 425

Query: 351 -------GAQLLGAAVIFAWVFGASLVVWGVLKATMGIRVSEEEEMEGMDMHDCGVGAY 402
                  GAQL GA V+  W  G   +++ VL    G+RV    E EG+D+++ G  AY
Sbjct: 426 GHGAGFLGAQLFGAVVVGVWAAGMGFIIFKVLDKIHGLRVPARVEEEGLDIYEHGESAY 484