Pairwise Alignments

Query, 409 a.a., ammonium transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 466 a.a., ammonium transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  187 bits (476), Expect = 4e-52
 Identities = 136/405 (33%), Positives = 198/405 (48%), Gaps = 33/405 (8%)

Query: 15  DTFFFLISGALVMWMAA-GFAMLEAGLVRSKNTTEILTKNFVLYAIACTTYLIVGYNIMY 73
           +T + L S ALV+ M   G A+   GLVRSKN   IL + F + AIA   + +VGY+I +
Sbjct: 64  NTAWILSSSALVLLMTLPGLALFYGGLVRSKNVLSILMQCFSIAAIASVLWFVVGYSIAF 123

Query: 74  VDNTE--GGWLPSFGALIGSQADGADHSLESDFFFQVVFVATAMSVVSGAVAERMKLWAF 131
                  GG   +F A IG  +   D        FQ+ F     +++ G  AERM+  A 
Sbjct: 124 DTGNGFIGGLGKAFLASIGRDSVSGDIPEPLFMLFQMTFAIITPALIIGGFAERMRFSAV 183

Query: 132 LIFSAVLTAFIYPVEGYWTWGGGFLSAAGFSDFAGSGIVHLAGASAALAGVLLLGARKGK 191
           L+FS+     +Y    +W WGGG+L+  G  DFAG  +VH+    AAL    +LG RKG 
Sbjct: 184 LMFSSAWLLLVYAPITHWVWGGGWLAELGLYDFAGGTVVHITAGVAALVAAKVLGPRKGF 243

Query: 192 YGKNGEIYPIPGSNMPLATLGTFILWFGWFGFNGGSQLMVSDFENATSVGKIFLNTNAAA 251
              N  I P    N+ +   G  +LW GWFGFNGGS L      N T+   I L T+ AA
Sbjct: 244 L--NSAIMP---HNLTMTVTGAGMLWVGWFGFNGGSALGA----NGTAAMAI-LATHLAA 293

Query: 252 AAGAIAALLVCKTTWGKADLTMVLNGALAGLVAITADPLSPSPLYSVAIGAVSGSLVVFS 311
           + GAI    +    +GKA    ++ G +AGL  IT       P  ++ IG + G +  FS
Sbjct: 294 SMGAITWAGIEWYKFGKASALGIVTGMVAGLGTITPASGYVGPAGALVIGFLGGVVCFFS 353

Query: 312 IIGL-DKLKIDDPVGAISVHGVCGFFGLMVVPLSNADA------------------TFGA 352
            + +  KLKIDD +    VHGV G  G ++  + ++                      GA
Sbjct: 354 TVYIKQKLKIDDSLDVFPVHGVGGILGTLLAGVFSSTQLGIFSGYGFASVNPTMLDQLGA 413

Query: 353 QLLGAAVIFAWVFGASLVVWGVL-KATMGIRVSEEEEMEGMDMHD 396
           Q +G     ++    S +++ V+ K   G+RVS E+E+ G+D+ +
Sbjct: 414 QAIGVIATLSYTALVSWLLFVVIGKILGGLRVSTEQEVNGLDLSE 458