Pairwise Alignments

Query, 112 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 121 a.a., P-II family nitrogen regulator from Methanococcus maripaludis JJ

 Score = 63.9 bits (154), Expect = 6e-16
 Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 15/124 (12%)

Query: 1   MKLINAIIKPFKLDDVREALADVGIEGMTVSEVKGFGRQKGHTELYRGAEYQVD------ 54
           MK I AII+P K+   +  L  +G   MT + V G G+QK    +     ++VD      
Sbjct: 1   MKEIIAIIRPSKMAQTKTVLEGLGFPAMTANRVLGRGKQKA---IVGELGFEVDNKELLN 57

Query: 55  ------FLPKVKIEIATQSDNVDRVVEAIIKAAHTGKIGDGKIFVYDLSQAVRIRTGEMD 108
                 ++PK  + +    ++   VVEAI+K   +G+ GDGKIFV  +   + +RT E  
Sbjct: 58  QPGDMRYIPKTMLTLIVPDEDASLVVEAIMKVNKSGQYGDGKIFVCPIEDIITVRTSERG 117

Query: 109 SEAL 112
             A+
Sbjct: 118 EAAI 121