Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 738 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  577 bits (1488), Expect = e-169
 Identities = 312/709 (44%), Positives = 438/709 (61%), Gaps = 5/709 (0%)

Query: 46  VLVFIGIYLDSMIKQRFEGQLFDLPTVVYARILTLEPGNGLSLQELRNELDVLNYRKVAQ 105
           VL    +YLD++++++F G+ + +P  VYAR L L  G  LS  +   ELD L YR+ + 
Sbjct: 1   VLAGFAVYLDAVVQEKFSGKRWTIPAKVYARPLELFVGQKLSKDDFLTELDALGYRRESV 60

Query: 106 PRFPGEYASSSSRIELIRRPFEFADGPEPDRRVMLTFDGSGLNKIESLEQKRELGYLRLE 165
              PG  + + + I+L  R F+F +G E  + V + F G  +  +        L  +RLE
Sbjct: 61  ANGPGAASVNGNTIDLNTRGFQFYEGMEQAQPVRVRFSGDYVAALTGANNA-SLSVVRLE 119

Query: 166 PKLMGMLEKDSPEQRLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKA 225
           P L+G L   + E R+ ++ DQ P  L+D L+  EDRDFY H GVSP +I RA+ VN  +
Sbjct: 120 PLLIGGLYPKNLEDRILIKIDQVPPFLLDTLIAVEDRDFYHHFGVSPKSIARAVWVNTSS 179

Query: 226 GRTVQGGSTLTQQLAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQ 285
           G   QGGSTLTQQL KN +L+++R+L RKL EA MAL+++  Y K  ILEAYLNEV++GQ
Sbjct: 180 GHMRQGGSTLTQQLVKNFYLTNERSLTRKLTEAMMALLLELHYDKQEILEAYLNEVFIGQ 239

Query: 286 SGADAIHGFGLASRLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLK 345
            G  A+HGFGLAS+ +F QPL EL++ Q+ALLVGMVKGPS YNP R  ERA ERR+LVL 
Sbjct: 240 DGQRAVHGFGLASQFFFSQPLSELKLHQVALLVGMVKGPSSYNPRRNPERALERRNLVLD 299

Query: 346 LMMEHDILTAPEYQQAVTRPLDVQKTAQIA-SRQPAYFQQVSIELKEKLGDKFKADSGLR 404
           L+ +  + TA + + A   PL V K   +A S  P +   V  +L+E   D+   + GLR
Sbjct: 300 LLQQQGVATAEQVEAAKKMPLGVTKRGSLADSSFPGFMDLVKRQLREDYRDEDLTEEGLR 359

Query: 405 VFTSLDPVSQSKLEQAIHDQIPQLAKTAGKD-LEAAAIAVDRHSGEIRAMVGGKRTGYDG 463
           +FTS DP+ Q K E ++ D   +L    G D +EAA +  +  +GE++AM+G ++  + G
Sbjct: 360 IFTSFDPILQMKAEASVEDTFKRLGGRKGADEVEAAMVVTNPETGEVQAMIGSRQASFAG 419

Query: 464 FNRVLNASRQIGSLVKPAVYLTALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQY 523
           FNR L+A R IGSL+KPAVYLTAL  P QY L + L D+  ++KG++G  W P+NYDR+ 
Sbjct: 420 FNRALDAVRPIGSLIKPAVYLTALEKPSQYTLTSWLSDETFSVKGADGQVWKPQNYDRRS 479

Query: 524 RGEVPLYLALAQSLNVPTVALGMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPY 583
            G V LY  LA S N+ T  LG+++G+  V  TL +LGV+R E+   PSMLLG+  LTP 
Sbjct: 480 HGTVFLYQGLAHSYNLSTARLGLEVGVPNVLKTLARLGVSR-ELPAFPSMLLGAGGLTPI 538

Query: 584 QVAQMYQTLTNSGKKAPLSALRSVLDLEGNVLYESLPRVSQAVDQQAAWLTTYAMKQGVQ 643
           +VA MYQTL N G   P+  +RSVL  +G  L     ++ Q  D  + +L   AM++ ++
Sbjct: 539 EVAAMYQTLANGGFNTPMRGIRSVLTADGEPLKRYPFQIQQRFDPASIYLIQSAMQRVMR 598

Query: 644 EGTGRYL-NAQFSSAALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPTKLTGASG 702
           EGTG  + N    +  LAGKTGT+ND+RDSWF G     +  +WLGRDDN  T  TGA+G
Sbjct: 599 EGTGSSVYNVLPRTLTLAGKTGTSNDSRDSWFAGFSQDLLAVVWLGRDDNGKTPFTGATG 658

Query: 703 ALRVYAQYLKYRIPEKLQLPWPEGITTFGFAKQTQGGLKLDCDNAFKLP 751
           AL+V+  +++   P  L +P P+ I       +T  G   +C  A ++P
Sbjct: 659 ALQVWTSFMRKADPLPLDMPQPDNIVQAWVDSRTGQGSDANCPGAVQMP 707