Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 770 a.a., penicillin-binding protein 1B from Pseudomonas stutzeri RCH2

 Score =  596 bits (1536), Expect = e-174
 Identities = 335/753 (44%), Positives = 467/753 (62%), Gaps = 16/753 (2%)

Query: 1   MTRKSSNRSRGRKARSGKSASSSKLQIWLGRIWSIGWKLALTLAAVLVFIGIYLDSMIKQ 60
           MT+  S R+R ++  +G          WLG  W++  KL++    +L    IYLD+++++
Sbjct: 1   MTKPRSPRTRSKRRSAGARP-------WLG--WAV--KLSIVGLVILAGFAIYLDAVVQE 49

Query: 61  RFEGQLFDLPTVVYARILTLEPGNGLSLQELRNELDVLNYRKVAQPRFPGEYASSSSRIE 120
           +F G+ + +P  VYAR L L  G  L   +   ELD L YR+      PG  + S + IE
Sbjct: 50  KFSGKRWTIPAKVYARPLELFVGQKLDKNDFLAELDALGYRRERAVSGPGGASVSGNDIE 109

Query: 121 LIRRPFEFADGPEPDRRVMLTFDGSGLNKIESLEQKRELGYLRLEPKLMGMLEKDSPEQR 180
           L  R F+F +G E  +R+ + F G  +  + S      L   RLEP L+G L     E R
Sbjct: 110 LHTRGFQFYEGAEQSQRLRVRFSGDFVAGL-SAGNGGTLPVARLEPVLIGGLYPAHNEDR 168

Query: 181 LFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLA 240
           + ++ DQ P  LV+ L+  EDR+F+ H GVSP +I RA+ VNL AG+  QGGSTLTQQL 
Sbjct: 169 ILIKLDQVPPYLVETLVAVEDREFFNHFGVSPKSIARAVWVNLTAGQVRQGGSTLTQQLV 228

Query: 241 KNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRL 300
           KN +L+++R+L RK+ EA MA++++  Y K  ILEAYLNEV+LGQ G  A+HGFGLAS+ 
Sbjct: 229 KNFYLTNERSLNRKVTEAMMAVLLELHYDKQEILEAYLNEVFLGQDGRRAVHGFGLASQY 288

Query: 301 YFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQ 360
           +FGQPL EL++ Q+ALLVGMVKGP+YYNP R  ERA ERR+LVL L+ E  +++A +  +
Sbjct: 289 FFGQPLAELKLPQVALLVGMVKGPTYYNPRRNPERALERRNLVLDLLAEQQVVSADDVAK 348

Query: 361 AVTRPLDVQKTAQIA-SRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQ 419
           A   PL V +   +A S  PA+   V  +L+E   D+   + GLRVFTS DP+ Q K EQ
Sbjct: 349 AKQAPLGVTQRGSMADSSYPAFLDLVKRQLREDYRDEDLTEEGLRVFTSFDPILQLKAEQ 408

Query: 420 AIHDQIPQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVK 479
           A+ + + +L K+  + +E A I  +  +GEI+A++G ++ G+ GFNR L+ASR IGSL+K
Sbjct: 409 AMSETLKRLGKST-EGVEGAMIVTNPETGEIQALLGSRQPGFAGFNRALDASRPIGSLIK 467

Query: 480 PAVYLTALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNV 539
           PA+YL AL  P QY L + LED+P ++KG++G  W P+NY RQ  G V LY ALA S N+
Sbjct: 468 PAIYLAALEKPSQYTLTSLLEDEPFSVKGADGQVWKPQNYGRQAYGTVYLYQALANSYNL 527

Query: 540 PTVALGMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKA 599
            T  LG+ LG+  V  TL +LG +  +    PSMLLG+  L P +VA MYQTL N G   
Sbjct: 528 STARLGLDLGVPNVLKTLERLGAS-PKWPAYPSMLLGAGGLRPIEVADMYQTLANGGFNT 586

Query: 600 PLSALRSVLDLEGNVLYESLPRVSQAVDQQAAWLTTYAMKQGVQEGTGR-YLNAQFSSAA 658
           PL  +RSVL  +G  L     ++ Q  D  A +LT YAM++ + EGTGR   N    S  
Sbjct: 587 PLRGIRSVLTADGEPLKRYPFQIQQRFDPGAIYLTQYAMQRAMSEGTGRSAYNRLPRSLN 646

Query: 659 LAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPTKLTGASGALRVYAQYLKYRIPEK 718
           LAGKTGTTND+RDSWF G     +  +WLGRDDN  T LTGA+GAL+V+  +++   P  
Sbjct: 647 LAGKTGTTNDSRDSWFAGFSQDLLAVVWLGRDDNGKTSLTGATGALQVWTDFMRRADPLP 706

Query: 719 LQLPWPEGITTFGFAKQTQGGLKLDCDNAFKLP 751
           LQ+P P+ +T      ++  G    C +A ++P
Sbjct: 707 LQMPVPDNVTYAWVDARSGLGTDERCPDAVQMP 739