Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 773 a.a., Peptidoglycan glycosyltransferase from Pseudomonas syringae pv. syringae B728a

 Score =  588 bits (1516), Expect = e-172
 Identities = 330/774 (42%), Positives = 467/774 (60%), Gaps = 16/774 (2%)

Query: 9   SRGRKARSGKSASSSKLQIWLGRIWSIGWKLALTLAAVLVFIGIYLDSMIKQRFEGQLFD 68
           +R R +RS K      L  WLG  W++  KL +    +L  + IYLD++++++F G+ + 
Sbjct: 2   TRSRTSRSAKKQPPRSLNKWLG--WAL--KLGIVGLVLLGGLAIYLDAIVQEKFSGKRWT 57

Query: 69  LPTVVYARILTLEPGNGLSLQELRNELDVLNYRKVAQPRFPGEYASSSSRIELIRRPFEF 128
           +P  VYAR L L  G  LS  +   ELD L YR+ +    PG  A + + ++L  R F+F
Sbjct: 58  IPAKVYARPLELFVGQKLSRDDFLIELDALGYRRESVANGPGAAAVNGNTVDLNTRGFQF 117

Query: 129 ADGPEPDRRVMLTFDGSGLNKIESLEQKRELGYLRLEPKLMGMLEKDSPEQRLFLRRDQF 188
            +G +  ++V + F G  +  + S     +L   RLEP L+G L   + E R+ ++ DQ 
Sbjct: 118 YEGTDAAQQVRVRFSGDYVADLSS-GNGAKLAVARLEPLLIGGLYPKNLEDRILIKLDQA 176

Query: 189 PEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFLSSD 248
           P  L+D L+  EDRDFY H GVSP +I RA+ VN   G+  QGGSTLTQQL KN +L+++
Sbjct: 177 PPYLLDGLVAVEDRDFYHHFGVSPKSIARAIWVNTSQGQMRQGGSTLTQQLVKNFYLTNE 236

Query: 249 RTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQPLQE 308
           R+L RKL EA MA++++  YSK  ILEAYLNEV++GQ G  A+HGFGLAS+ +F QPL E
Sbjct: 237 RSLTRKLTEAMMAVLLEIHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQYFFSQPLSE 296

Query: 309 LRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRPLDV 368
           L+I Q+A+LVG+VKGPS+YNP R  ERA ERR+LVL L  +  + T      A   PL V
Sbjct: 297 LKIHQVAMLVGLVKGPSFYNPRRNPERALERRNLVLDLFEQQGVATPEVVAAAKKMPLGV 356

Query: 369 QKTAQIA-SRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHDQIPQ 427
            KT  +A S  PA+   V  +L+E   D+   + GLR+FTS DP+ Q K + A+ D   +
Sbjct: 357 TKTGTLADSSFPAFLDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKSQAAMDDTFKK 416

Query: 428 LAKTAGKD-LEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTA 486
           LA   G D +E+A +  +  +GE++A++GG+  G+ GFNR ++A R IGSLVKPA+YLTA
Sbjct: 417 LAGRKGSDEVESAMVVTNPETGEVQALIGGREAGFSGFNRAIDAVRPIGSLVKPAIYLTA 476

Query: 487 LAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGM 546
           L  P QY L + + D+   +KG++G  W P+NYD +  G + LY  LA S N+ T  LG+
Sbjct: 477 LERPSQYTLTSWIADELFQVKGADGQIWKPQNYDHKSHGNIFLYQGLAHSYNLSTAKLGL 536

Query: 547 KLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRS 606
           +LGI  V  TL KLGV R E    PSMLLG+  L+P +VA MYQT+ + G   P+  +RS
Sbjct: 537 ELGIPNVFKTLAKLGVTR-EWPTYPSMLLGAGGLSPMEVATMYQTIASGGFNTPMRGIRS 595

Query: 607 VLDLEGNVLYESLPRVSQAVDQQAAWLTTYAMKQGVQEGTGRYL-NAQFSSAALAGKTGT 665
           VL  EG  L     ++ Q  D  A +L   AM++ ++EGTG+ + N   SS  LAGKTGT
Sbjct: 596 VLTAEGEPLKRYPFQIEQRFDPGAIYLVQNAMQRVMREGTGKSVYNVLPSSLNLAGKTGT 655

Query: 666 TNDNRDSWFVGVDGREVTTIWLGRDDNQPTKLTGASGALRVYAQYLKYRIPEKLQLPWPE 725
           +ND+RDSWF G     +  +W+GRDDN  T  TGA+GAL+V+  +++   P  L +  P+
Sbjct: 656 SNDSRDSWFAGFSQDLLAVVWMGRDDNGKTPFTGATGALQVWTSFMRKAGPLPLDMAMPD 715

Query: 726 GITTFGFAKQTQGGLKLDCDNAFKLP-IWDNQQQLKQQCENRPT------EWIK 772
            +       QT  G    C NA ++P I  ++ Q    C   P       +W+K
Sbjct: 716 NVVQAWVDAQTGQGSDASCPNAVQMPYIRGSEPQPGATCGGAPAPATEVMDWVK 769