Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 749 a.a., PBP1A family penicillin-binding protein from Synechocystis sp000284455 PCC 6803

 Score =  218 bits (555), Expect = 9e-61
 Identities = 177/561 (31%), Positives = 269/561 (47%), Gaps = 52/561 (9%)

Query: 180 RLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQL 239
           R F     F   L  A++ +ED  FY H GV P  +GRA+ +NL+     QG STLTQQL
Sbjct: 208 REFDNLSDFSPYLPQAVIASEDTRFYWHFGVDPYGLGRAIYINLQDRDVKQGASTLTQQL 267

Query: 240 AKNIF--LSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLA 297
           A+++F  +  + T  RK+RE ++AL ++  YSKD IL+AYLN VYLG       +GF  A
Sbjct: 268 ARSLFSEVGRENTAGRKIREMFVALKLEAVYSKDDILKAYLNRVYLGAGN----YGFEDA 323

Query: 298 SRLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPE 357
           ++ YF +  Q+L + + A LV M+  P+ YNP++  + + + R+ V++ M    ++   E
Sbjct: 324 AQFYFDKSAQDLDVGEAATLVAMLPAPNLYNPVQDYQTSVQLRNRVIERMAMLGMIDEQE 383

Query: 358 YQQAVTRPLDV--QKTAQIASRQPAYFQ-QVSIELKEKLGDKFKADSGLRVFTSLDPVSQ 414
             +A    + V  + T  ++ RQ  YF   +  EL   LG+    +    V TSL+   Q
Sbjct: 384 ANRARRSRIQVSPKATQTLSQRQAPYFYGYIFGELNHLLGEDVAKEGNFVVETSLNLKMQ 443

Query: 415 SKLEQAIHDQIPQLAKTAGKDL---EAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNAS 471
           +  E+++     +   T GK     + A + +D  +G + AMVGGK      FNR   A 
Sbjct: 444 ALAEKSLQ----KFLTTEGKKYAVSQGAVVTLDSRTGAVLAMVGGKSYRESQFNRASQAQ 499

Query: 472 RQIGSLVKPAVYLTALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYR-GEVPLY 530
           RQ GS  K   Y  A+A     N A   E  P T        W  +NY    R G  P  
Sbjct: 500 RQPGSTFKLFAYTAAIAKGVSTNQA--FECGPFT--------WQGQNYKPCERSGAAPAI 549

Query: 531 L---ALAQSLNVPTVALGMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQ 587
                 AQS NV  + +   +G+D++ A     GVN   ++  P ++LG       ++  
Sbjct: 550 TFAEGFAQSENVVALRVAQTVGLDEIIALAKDFGVNSSLVKE-PGLVLGQSEARVLEMTG 608

Query: 588 MYQTLTNSG---KKAPLSALRSVLDLEGNVLYESLPRV----------SQAVDQQAAWLT 634
            Y  + N G   +   +  +R   D       +S   V           Q V    A   
Sbjct: 609 AYGAIANGGVWNRPHGIVNIRDGGDCPDPEQLKSCREVYQVSQDGRGQKQVVSPAIAATM 668

Query: 635 TYAMKQGVQEGTGRYLNAQFSSAALAGKTGTTNDNRDSWFVGVDGRE--VTTIWLGRDDN 692
           T  ++  V  GTG+  +  + +   AGKTGTT+   D WF+G   ++  VT IWLG DD+
Sbjct: 669 TQLLQAAVTNGTGKAADIGYGT---AGKTGTTDKAVDLWFIGFLPQKNLVTGIWLGNDDS 725

Query: 693 QPTKLTGASG-ALRVYAQYLK 712
            PT+  G+SG A  ++ QY++
Sbjct: 726 SPTQ--GSSGLAATLWGQYMR 744