Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., Penicillin-binding protein 1A from Synechococcus elongatus PCC 7942

 Score =  309 bits (792), Expect = 3e-88
 Identities = 198/548 (36%), Positives = 301/548 (54%), Gaps = 29/548 (5%)

Query: 186 DQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFL 245
           +Q    L  ++L  ED +FY H G++P+ IGRA+V N  +G  V+GGSTLT QL KN+FL
Sbjct: 84  NQISPKLQQSVLAIEDSNFYDHPGINPIGIGRAIVANFSSGGVVEGGSTLTMQLVKNLFL 143

Query: 246 SSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQP 305
           + DR   RKL EA +AL ++   SKDRILE YLN+VY G++    ++G  +ASR YF + 
Sbjct: 144 TPDRNFGRKLSEAVLALRLEQVISKDRILELYLNQVYWGRN----LYGVEMASRSYFNKS 199

Query: 306 LQELRIDQLALLVGMVKGPSYYNPM--------RYAERARERRDLVLKLMMEHDILTAPE 357
              L   + + L G++  P +Y P         +  ERA+ER+ LVL+ ++E   L+   
Sbjct: 200 AANLDWAEASFLAGLIAAPEFYTPFDERDRLSPQRLERAKERQRLVLQRLVEIGQLSPSA 259

Query: 358 YQQAVTRPLDVQKTAQIASRQPAYFQQVS----IELKEKLGDKFKADSGLRVFTSLDPVS 413
              A   PL   K  +I+S +P+    VS     EL ++ G       GLRV T++D   
Sbjct: 260 ASAAAAEPL---KFGEISSFRPSSAPYVSDAVIQELAQQFGRSAVVQGGLRVQTTIDLRM 316

Query: 414 QSKLEQAIHDQIPQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQ 473
           Q   E+ I +   +  +   +  E A +A+D  +  I+AMVGG       +NRV  A RQ
Sbjct: 317 QRLAEKVIQENYQRNRRAGLRADEMALVAIDPRTHFIKAMVGGVDYRTSQYNRVTQARRQ 376

Query: 474 IGSLVKPAVYLTALAHPDQYNLATTLEDKPLTLK-GSEGSAWTPRNYDRQYRGEVPLYLA 532
            GS  KP V+  ALA   +Y   +++ D P+T + G+E   ++P+NYDR + G + L  A
Sbjct: 377 PGSAFKPFVFYAALA-TGKYRPNSSIADTPVTYQLGAE--TYSPQNYDRSFAGNMSLTSA 433

Query: 533 LAQSLNVPTVALGMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTL 592
           LAQS N+P V LG  +G+D+V     ++G++   ++PV S+ LG+  +TP ++   Y TL
Sbjct: 434 LAQSRNIPAVRLGQTVGLDRVIEICRRIGIS-SPMQPVVSLPLGAIGVTPLELTNAYATL 492

Query: 593 TNSGKKAPLSALRSVLDLEGNVLYESLPRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNA 652
            + G  AP + +  V D +G  L +  PR    +  +A       M+  V  GTGR   A
Sbjct: 493 ASGGWYAPPTLILQVRDSQGRRLLDHTPRPQPELQSKAVAQLNQMMQAVVTSGTGR--AA 550

Query: 653 QFSSAALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPT--KLTGASGALRVYAQY 710
           QF +  +AGKTGTT+D RD WFVG       ++WLG DDN       TG + A  ++ ++
Sbjct: 551 QF-NRPVAGKTGTTSDERDIWFVGYTPDLAASVWLGNDDNSKIGGGATGGAIAAPIWREF 609

Query: 711 LKYRIPEK 718
           ++  + ++
Sbjct: 610 MQQALAQQ 617