Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 740 a.a., Penicillin-binding protein 1A from Synechococcus elongatus PCC 7942

 Score =  256 bits (655), Expect = 2e-72
 Identities = 185/545 (33%), Positives = 280/545 (51%), Gaps = 43/545 (7%)

Query: 188 FPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIF--- 244
           F  VL  ALL +ED  FY H G+ P    RA++ N ++G   +G STLTQQ+A+++F   
Sbjct: 213 FSPVLPKALLASEDSRFYWHLGIDPYGTARAILTNFRSGEVREGASTLTQQIARSLFSDY 272

Query: 245 LSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQ 304
           +  + ++ RK+REA +AL +++ YSKD +L  YLN VYLG       +GF  A+++YFG+
Sbjct: 273 VGREDSIGRKVREAILALKLEFFYSKDELLRTYLNRVYLGVG-----YGFEDAAQIYFGK 327

Query: 305 PLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTR 364
             ++L   + ALLVG++  P+ ++P      A+ +++ V++ M    +++  E + A   
Sbjct: 328 SARDLSTSEAALLVGLLPSPNGFSPCTNLAAAQRQKNGVIERMQSLGLISEEEARTARRS 387

Query: 365 PLDVQKTA-QIASR--QPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAI 421
           P+ ++  A Q +SR   P Y+  V  EL + +GD    +    V TSL+P  Q+  EQ++
Sbjct: 388 PVTIKPEACQTSSRVTAPYYYGAVVEELAQLVGDTVVEEGNFAVETSLNPAMQTAAEQSL 447

Query: 422 HDQIPQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPA 481
                 LA+TAG   + A + +D  +GEIRA+VGG       F+R   A RQ GS  K  
Sbjct: 448 QS---LLAQTAGVK-QGAIVTIDSRNGEIRALVGGVDYQASQFDRATQAYRQPGSTFKVF 503

Query: 482 VYLTALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPT 541
            Y  AL      +     +  PL  +G +      R  +R   G + L  ALAQS N   
Sbjct: 504 AYAAAL--EQGISAGRPYDCSPLVWQGQQF-----RGCERS-SGSIDLARALAQSENAVA 555

Query: 542 VALGMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPL 601
           + +  ++G+D V     K G+  D ++PVP ++LG   +T  ++   +  + N G+  P 
Sbjct: 556 LRVAREVGLDAVVQMARKFGIKAD-LQPVPGLVLGQSEVTLLEMTSAFAAIANEGRWNPP 614

Query: 602 SALRSVLDLEGNVLYE------------SLPRVSQAVDQQAAWLTTYAM-KQGVQEGTGR 648
            A+R + D       E              PR  + V   A   T  AM +Q V  GTG 
Sbjct: 615 HAIRRIYDSSRCTTAEQRRSCTLTFDVQQQPRRDRVVISAATAATLTAMLQQAVSSGTG- 673

Query: 649 YLNAQFSSAALAGKTGTTNDNRDSWFVG-VDGRE-VTTIWLGRDDNQPTKLTGASGALRV 706
              A       AGKTGTTND  D WFVG V  R  VT +WLG DDNQPT    +S A ++
Sbjct: 674 --GAAAIGYGAAGKTGTTNDGVDLWFVGFVPSRHLVTGVWLGNDDNQPTG-NSSSLAAQL 730

Query: 707 YAQYL 711
           +  Y+
Sbjct: 731 WGDYM 735