Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., Penicillin-binding protein 1A from Synechococcus elongatus PCC 7942

 Score =  278 bits (711), Expect = 7e-79
 Identities = 201/565 (35%), Positives = 290/565 (51%), Gaps = 34/565 (6%)

Query: 171 MLEKDSPEQRLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQ 230
           +L+K  P  R  +   Q P  L  A L  EDR FY+H G+    I RA V NL +G+  +
Sbjct: 39  VLQKIGPATRDKVPFKQIPLRLRQAFLAAEDRRFYEHSGIDLFGIARASVTNLLSGQVQE 98

Query: 231 GGSTLTQQLAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADA 290
           G ST+TQQLA+ +FLS +R+L RKL EA MA  ++   +KD+ILE YLN VYLG +GA  
Sbjct: 99  GASTITQQLARIVFLSQERSLQRKLNEALMAQKLEQELTKDQILEQYLNLVYLG-AGA-- 155

Query: 291 IHGFGLASRLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEH 350
            +G   A+  YF +P+Q+L + ++A L G+   P+ Y+P+   E A+ERR+ VL  M E 
Sbjct: 156 -YGVADAAWTYFSKPVQDLSLGEMATLAGLPPAPTAYSPLVSLEVAQERRNSVLSRMQEV 214

Query: 351 DILTAPEYQQAVTRPLDVQKTA--QIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTS 408
             +T  E + A   PL ++  A     S  P +   V  EL   +        GL + T+
Sbjct: 215 GFITPSEAEAARREPLALKPAAPKYAQSLAPYFTDYVRQELPRFVAPDVLEYGGLTLKTT 274

Query: 409 LDPVSQSKLEQAIHDQIPQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVL 468
           L+   Q   +QAI +       T G  L+ A +++D   G IRAMVGG       FNR  
Sbjct: 275 LNYRWQQAADQAIQN------STYG-SLQGALVSIDPRDGAIRAMVGGVDFNRSQFNRAT 327

Query: 469 NASRQIGSLVKPAVYLTALA---HPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRG 525
            A RQ GS  K  VY  A+A    P Q  L     D  + L G     + P+N+ R + G
Sbjct: 328 QAYRQPGSTFKMFVYAAAIASGMSPSQVYL-----DAAINLGG-----YKPQNFSRSFSG 377

Query: 526 EVPLYLALAQSLNVPTVALGMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQV 585
            + L  AL  S+N+  + +   +GID V     ++G+  D  R  P + LG+  +T  ++
Sbjct: 378 SISLTQALTNSVNIVAIKVLRDVGIDNVIRVARQMGIRADLARYYP-LALGASDVTLLEI 436

Query: 586 AQMYQTLTNSGKKAPLSALRSVLDLEGNVLYESLP-RVSQAVDQQAAWLTTYAMKQGVQE 644
              Y TL N GK      +  ++D  G VLY+    +  QA+D  +A + T  +++ V  
Sbjct: 437 TSAYGTLANQGKYLTPHPIAEIIDHRGRVLYQDKQIKPVQALDPGSAAIVTSMLERVVTS 496

Query: 645 GTGRYLNAQFSSAALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPTKLTGASGAL 704
           GTG    A     A+AGKTGTT   RD WF+G   + VT +WLG D+  PT    ++ A+
Sbjct: 497 GTG--AAAYLPDRAVAGKTGTTEQARDLWFIGYIPQLVTGVWLGYDNFAPTGSGSSAAAV 554

Query: 705 ---RVYAQYLKYRIPEKL-QLPWPE 725
              R   + +K   PEK   LP P+
Sbjct: 555 AWYRFMVEAIKDLPPEKFPPLPNPD 579