Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 767 a.a., penicillin-binding protein from Sinorhizobium meliloti 1021

 Score =  269 bits (688), Expect = 4e-76
 Identities = 186/530 (35%), Positives = 278/530 (52%), Gaps = 44/530 (8%)

Query: 195 ALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFLSSDRTLWRK 254
           A++  EDR FY H GV PL + RAM+ N+ +GR VQGGSTLTQQLAKN+FLS +RTL RK
Sbjct: 167 AVIAIEDRRFYSHFGVDPLGLARAMLTNVMSGRMVQGGSTLTQQLAKNLFLSPERTLERK 226

Query: 255 LREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQPLQELRIDQL 314
           ++E  +A  ++ +Y+KD+IL  YLN V+ G +     +G   ASR YF +  +++ + + 
Sbjct: 227 VQEVLLAFWLEQKYTKDQILAMYLNRVFFGSNA----YGVEAASRRYFNKSARDVNLGEA 282

Query: 315 ALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRPLDVQKTAQI 374
           ALL G++K PS  +P R  E A ER  LVL  M E   ++  E + A+         +Q 
Sbjct: 283 ALLAGLLKAPSRLSPARDPEAAEERAQLVLGAMREEGFISDSEIKTAM---------SQA 333

Query: 375 ASRQPAYFQQVSIELKEKLGDKFKADSG-----LRVFTSLDPVSQSKLEQAIHDQIPQLA 429
            +R  +++      + + + D+     G     L + T++D   + K E+ + +++    
Sbjct: 334 PTRAKSFWSGAEHYVADMVMDQVPGMIGEVTQDLVIDTTIDLTLEKKAEEVLAERL---- 389

Query: 430 KTAGKDL---EAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTA 486
           +T G  L   +AA +++D  +G IRA+VGG+      F+R   A RQ GS  KP VY  A
Sbjct: 390 ETEGGKLNASQAALVSID-GTGAIRALVGGRDYAESQFDRASKAKRQPGSAFKPFVYAAA 448

Query: 487 LAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGM 546
           L         +   D P+ +       WTP NYD++YRGEV L  ALA SLN     L M
Sbjct: 449 L--EIGRTPMSVRNDAPVRI-----GNWTPENYDQKYRGEVTLADALANSLNTIAAQLVM 501

Query: 547 KLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRS 606
           ++G   V     +LG++ D ++   S+ LG+  +T  ++   Y    N G KA    +R 
Sbjct: 502 EVGPQNVVKLAHRLGIDSD-MQANASIALGTSEVTLVELTSSYAPFMNGGFKATPHVIRR 560

Query: 607 VLDLEGNVLYESL----PRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAALAGK 662
           +   +G VLYE+     PRV   +D          M + + +GTG+  NA+      AGK
Sbjct: 561 ISTADGTVLYENTYDNPPRV---LDPAIVSEMNRMMVRVLTDGTGK--NARLPGWEAAGK 615

Query: 663 TGTTNDNRDSWFVGVDGREVTTIWLGRDDNQ-PTKLTGASGALRVYAQYL 711
           TGTT   RD+ FVG      T IW G DD +   K+TG     R +  ++
Sbjct: 616 TGTTQSFRDALFVGYTSNLATGIWFGNDDGKFMKKVTGGGLPARAWHDFM 665