Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 744 a.a., penicillin-binding protein from Sinorhizobium meliloti 1021

 Score =  270 bits (689), Expect = 3e-76
 Identities = 178/533 (33%), Positives = 277/533 (51%), Gaps = 23/533 (4%)

Query: 186 DQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFL 245
           D+ P+ L+ A+L TEDR F+ H G+  L + RAM  N +AG  VQGGSTLTQQLAKN+FL
Sbjct: 133 DELPDHLIKAVLATEDRRFFDHWGIDFLGLARAMTENARAGGVVQGGSTLTQQLAKNLFL 192

Query: 246 SSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQP 305
           S++RT+ RK++EA++A+ ++   SK  IL  YL+  Y+G        G   A++ YFG+ 
Sbjct: 193 SNERTIERKIKEAFLAVWLESNLSKKEILRLYLDRAYMG----GGTFGAAAAAQFYFGKA 248

Query: 306 LQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRP 365
           + ++ + + A+L G+ K P+ Y P      AR R + VL  +++  ++T  +   A   P
Sbjct: 249 ITDVNLAESAMLAGLFKAPARYAPHVNLPAARARANEVLSNLVQGGLMTEGQVIAARLTP 308

Query: 366 LDVQKTAQIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHDQI 425
             V   AQ+  + P +F   + E  +++   F A   L V T++D   Q   E+A+   +
Sbjct: 309 ASVVDRAQV--KAPDFFLDWAFEEVQRIAAPF-AQHSLIVRTTIDMGLQQAAEEAVESGL 365

Query: 426 PQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLT 485
            Q  ++    ++  A+ +  H G +RAMVGG+  G   FNR   A RQ GS  K  VY  
Sbjct: 366 RQYGES--YKVKQGALVMVEHGGAVRAMVGGRDYGESQFNRATRALRQPGSSFK--VYTY 421

Query: 486 ALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALG 545
           A A        T + D P+T +G     W+P+NY R+Y G V +  ALA+S+N   V L 
Sbjct: 422 AAAMEKGMTPETVVVDAPITWRG-----WSPQNYGRKYAGRVTVMNALARSINTIPVRLA 476

Query: 546 M-KLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSAL 604
             KLG + ++ T  ++G+    +R   +M LG+  +T    A  Y      G ++    +
Sbjct: 477 KDKLGTEIIAETAKRMGI-ETPVRTDKTMPLGTSEVTVLDQATAYAVFPAGGLQSRRHGI 535

Query: 605 RSVLDLEGNVLYE---SLPRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAALAG 661
             +L+ +G++LY+     P   + + +QA       + Q    GT R   A  +     G
Sbjct: 536 SQILNYDGDILYDFGRDAPPPRRVLSEQAVSSMNRILTQIPVIGTARRA-ALDNGIVTGG 594

Query: 662 KTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPT-KLTGASGALRVYAQYLKY 713
           KTGTT   RD+WFVG  G   T +W G DD   T ++TG S     + + + Y
Sbjct: 595 KTGTTQAYRDAWFVGFTGDYTTAVWFGNDDYTSTDEMTGGSLPAMTFKRLMDY 647