Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 728 a.a., MrcA2 penicillin-binding protein from Sinorhizobium meliloti 1021

 Score =  162 bits (411), Expect = 5e-44
 Identities = 95/249 (38%), Positives = 144/249 (57%), Gaps = 9/249 (3%)

Query: 178 EQRLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAM---VVNLKAGRTVQGGST 234
           E+RL+L     PE +  A L  ED+ FY H G+  L++ +A     VNL +G+ + G ST
Sbjct: 64  ERRLYLPIAAIPERVKAAFLSAEDKSFYSHSGIDVLSVVKAAWSNAVNLSSGQRLIGAST 123

Query: 235 LTQQLAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGF 294
           +TQQLAKN  LSSDRTL RK++EA +++ I+   SKDRILE YLN++YLG       +G 
Sbjct: 124 ITQQLAKNFLLSSDRTLRRKIKEAVLSIRIERSLSKDRILELYLNDIYLGLGA----YGI 179

Query: 295 GLASRLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILT 354
              +  YF + + EL + + A L  + KGP+ YNP R+ ERA  RR+ V+  M  +  ++
Sbjct: 180 AAGALTYFEKSVSELTVAEAAYLAALPKGPNNYNPHRHPERAVSRRNWVIGQMQRNGFVS 239

Query: 355 APEYQQAVTRPLDVQKTAQ--IASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPV 412
           A +    + RPL V+  A+  + +    + ++V  E+  + G+    D GL V T+LDP 
Sbjct: 240 AAQASNMMARPLGVKPQAKNPVMAEANYFVEEVRREVAGQYGEAALYDGGLSVRTTLDPT 299

Query: 413 SQSKLEQAI 421
            Q+    A+
Sbjct: 300 LQAAALMAL 308



 Score =  129 bits (324), Expect = 6e-34
 Identities = 91/292 (31%), Positives = 131/292 (44%), Gaps = 26/292 (8%)

Query: 435 DLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTALAHPDQYN 494
           +++ A +++D ++G + A VGG       FNR   ASRQ GS  KP VY  AL     Y 
Sbjct: 435 EVQGAIVSMDPNTGRVLASVGGFSFAQSRFNRATQASRQPGSAFKPFVYAAAL--DTGYT 492

Query: 495 LATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGMKLGIDQVS 554
            AT + D P ++    G  W P+NYD ++ G   L   L  S N+ TV L   LG+D V 
Sbjct: 493 PATLVMDAPFSMPDGAGRLWKPKNYDGKFGGPSTLRTGLEMSRNLMTVRLARHLGMDLV- 551

Query: 555 ATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRSVLDLEGNV 614
           A  G+     D++ P   M LG+   T  ++   Y  L N G     S +  + D  G  
Sbjct: 552 AEYGRAFGLYDKLAPYLPMSLGAGETTLTRLVSAYAVLANGGHAVQPSMIDRIQDRHGRT 611

Query: 615 LYESLPRV---------------------SQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQ 653
           ++    R                       Q +D   A+  T  ++  V+ GT   ++  
Sbjct: 612 IFRHDDRACDRCNATRWLHQEEPVLRDTRKQVLDPMTAYQVTSMLRGVVERGTAHRVSQ- 670

Query: 654 FSSAALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPTKLTGASGALR 705
              A +AGKTGTTND +D WFVG     VT I++G D  +P      +  LR
Sbjct: 671 -LGAPVAGKTGTTNDEKDVWFVGYTPTLVTGIFMGYDAPKPMGYAKRAADLR 721