Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 781 a.a., MrcB penicillin binding protein B from Sinorhizobium meliloti 1021

 Score =  250 bits (639), Expect = 2e-70
 Identities = 178/560 (31%), Positives = 277/560 (49%), Gaps = 27/560 (4%)

Query: 172 LEKDSPEQRLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQG 231
           L +  P Q  + + +QFP  L+DA+L  EDR F  H G+    IGRA+V N +AG  ++G
Sbjct: 201 LVRQGPYQGPYAQYNQFPPHLIDAVLSIEDRRFMDHFGIDVRGIGRALVRNFEAGSVIEG 260

Query: 232 GSTLTQQLAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAI 291
           GST+TQQL K  +L SDRT+ RK++E  +AL ++ +  K  IL  YLN  YLG       
Sbjct: 261 GSTITQQLIKLQYLDSDRTIKRKIQEFVIALWLELKLGKKEILTRYLNSAYLGAGAT--- 317

Query: 292 HGFGLASRLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHD 351
            G   A+R+YF + +  L + + A+L G+++ PS +NP+   E AR+R  +VL  M+ + 
Sbjct: 318 -GMPAAARVYFNKNIDVLNLPESAMLAGLLRAPSQWNPIDNLEGARQRTAVVLDTMVANG 376

Query: 352 ILTAPEYQQAVTRPLDVQKTAQIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDP 411
            +TAP+ ++       +  T         +   +S    E  G    +     V T+L P
Sbjct: 377 KITAPDAERVKESFATLNPTMPTPRSGSWFADWISPRASEIAG---PSPGTTTVRTTLVP 433

Query: 412 VSQSKLEQAIHDQIPQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNAS 471
             Q   E+ + + +    +  G     AA+      G + AMVGG+      FNR + A 
Sbjct: 434 HLQQIAERVVRNALDTEGRAVG--ASQAALVAMTPDGAVVAMVGGRDYKQSQFNRAVTAM 491

Query: 472 RQIGSLVKPAVYLTALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYL 531
           RQ GS  K  VY  AL     +     + D P+ + G     W+P N   +YRG V +  
Sbjct: 492 RQPGSTFKLFVYYAAL--KAGFTPTDRVLDAPIDVNG-----WSPENSSGRYRGWVSIAE 544

Query: 532 ALAQSLNVPTVALGMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQT 591
           A A+SLN PTVAL  ++G+D V A   +LG++   +   PS+ LG+  ++  ++   Y +
Sbjct: 545 AFARSLNAPTVALAQEVGLDNVIAAARELGIDAPLV-STPSLALGTSEVSLLELTSAYAS 603

Query: 592 LTNSGKKAPLSALRSV-LDLEGNV-LYESLPRVSQAVDQQAAWLTTYAMKQ-GVQEGTGR 648
           +     KAP+     V     G    +      + A+D  A       + Q  V+ GTGR
Sbjct: 604 VRFG--KAPVEPWGIVHFQAAGQPRAFRVGSHTTPAIDLSAYQSDLVGLLQLAVERGTGR 661

Query: 649 YLNAQFSSAALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPTK-LTGASGALRVY 707
             +     A  AGKTGT+ +NRD+WFVG     +  +W+G DD+ P K +TG      ++
Sbjct: 662 EAD---PGAFAAGKTGTSQNNRDAWFVGFTEPLIAAVWVGNDDDTPMKGVTGGDLPAHIW 718

Query: 708 AQYLKYRIPEKLQLP-WPEG 726
             +++  +     +P  PEG
Sbjct: 719 RDFMREAMAAPAPIPERPEG 738