Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 750 a.a., Penicillin-binding protein 1A (NCBI) from Rhodospirillum rubrum S1H

 Score =  257 bits (656), Expect = 2e-72
 Identities = 205/618 (33%), Positives = 299/618 (48%), Gaps = 58/618 (9%)

Query: 114 SSSSRIELIRRPFEF--ADGPEPDRRVMLTFDGSGLNKIESLEQKRELGYLRLEPKLMGM 171
           S S R+   RRP +    + P P RR  L   G     I  +     LG L L   L  M
Sbjct: 4   SPSDRLSGNRRPEDIDPPEAPRPPRRPALRHPGRIALAIAGVVLA--LGVLVLAINLYTM 61

Query: 172 LEKDS---PEQRLFLRRD--------------------QFPEVLVDALLVTEDRDFYQHD 208
               S   PE+  FL  D                    + P  LV+A++  EDR F  H 
Sbjct: 62  PLSPSFQEPERSGFLIADAEGTVVATRGVTAGRPVALAEMPASLVNAVIAFEDRRFRDHW 121

Query: 209 GVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFLSSDRTLWRKLREAYMALIIDYRY 268
           GV P  I RA+ VNL++G   QG STLTQQL KN  L+ ++T  RK++EA +AL I+ + 
Sbjct: 122 GVDPRGIARAIWVNLRSGGRTQGASTLTQQLVKNTLLTPEKTFTRKIQEAMLALWIERKL 181

Query: 269 SKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQPLQELRIDQLALLVGMVKGPSYYN 328
           +KD ILE YLN +YLG       +G   A+R YF +P+ +L + + A++ G+++ P+   
Sbjct: 182 TKDEILERYLNSLYLGAGS----YGVDAAARRYFNKPVTDLSLAESAMIAGLIQAPARTG 237

Query: 329 PMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRPLDVQKTAQIASRQPAYFQQVSIE 388
           P    + AR+R +LVL +M +  ++ A E   A   P  +           A    ++ E
Sbjct: 238 PTTALDVARQRAELVLDVMRDQGLIGADEATWAKAHPASLAVPPVELPAYGAVSDWIADE 297

Query: 389 LKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHDQIPQLAKTAGKDLEAAAIAVDRHSG 448
            ++ LG          V ++LD   Q   +Q I + +   A+ AG     AA+      G
Sbjct: 298 ARKALG---PLSGDFLVVSTLDRRLQVLAQQTIQEGM--AAEGAGLRATQAALVAMAPDG 352

Query: 449 EIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTALAHPDQYNLATTLEDKPLTLKG 508
            + AMVGG+      FNR + A RQ GS+ K  VYLTAL+  + +     ++D PLT+ G
Sbjct: 353 RVLAMVGGRDYQESQFNRAVQARRQPGSIFKLFVYLTALS--NNWRPDDPIDDTPLTIDG 410

Query: 509 SEGSAWTPRNY-DRQYRGEVPLYLALAQSLNVPTVALGMKLGIDQVSATLGKLGVNRDEI 567
                W+P NY      G VPL +A A S N+  V L   +G + V AT   +G+ +D++
Sbjct: 411 -----WSPENYGGGAGHGSVPLRVAFAHSYNLAAVRLQEAVGREAVIATARSMGL-KDDL 464

Query: 568 RPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRSVLDLEGNVLYESLPRVSQAVD 627
           +P+PS+ LG+F  T   +   +  +  + +      +  VL   G+   E  P V Q+  
Sbjct: 465 QPLPSLALGTFPATLLDLTSAFAAVA-ADRATVQPRVIEVLRTPGS--GEIRPPVRQS-- 519

Query: 628 QQAAWLTTYA---MKQGVQEGTGRYLNAQFSSAALAGKTGTTNDNRDSWFVGVDGREVTT 684
            +A W    A   +   V +GTGR   A        GKTGTT DNRD+WF+G  G  V  
Sbjct: 520 GRAPWPRASALDLLNAVVTQGTGR---AAALGVPTYGKTGTTQDNRDAWFIGFAGNLVIG 576

Query: 685 IWLGRDDNQPTKLTGASG 702
           +W+G DD  P  +TG SG
Sbjct: 577 VWVGNDDETP--MTGISG 592