Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 731 a.a., penicillin-binding protein 1C from Rhodopseudomonas palustris CGA009

 Score =  191 bits (484), Expect = 2e-52
 Identities = 162/510 (31%), Positives = 242/510 (47%), Gaps = 56/510 (10%)

Query: 196 LLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFLSSDRTLWRKL 255
           LL  ED+ FYQH G+ PLA+GRA +  +  GR V GGST+T QLA+ +     R+L  KL
Sbjct: 122 LLAYEDKRFYQHHGIDPLAVGRAALQLVSHGRIVSGGSTITMQLARLMEPRRQRSLGAKL 181

Query: 256 REAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQPLQELRIDQLA 315
           R+   A+ ++ R SK +IL+ YL     G +    + G   AS  YFG+  + L + + A
Sbjct: 182 RQMVRAVELEQRLSKQQILDLYLALAPYGGN----LEGIRAASIAYFGKEPKRLTLAESA 237

Query: 316 LLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRPLDVQKTAQIA 375
           LLV + + P      R+ + A+  RD VL  M+E  ++ A +  QA    +  Q+     
Sbjct: 238 LLVALPQSPETRRLDRFPDAAQAARDRVLARMVEDGVIGADDAAQARAVAVARQRKPMPV 297

Query: 376 SRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHDQIPQLAKTAGKD 435
               +  Q V  +   KL           +  +LD   Q  LE    D+    A   G D
Sbjct: 298 LAPHSADQAVIADKNAKL-----------IRLTLDAGLQRALETLARDR----AAALGPD 342

Query: 436 LEAAAIAVDRHSGEIRAMVGG------KRTGYDGFNRVLNASRQIGSLVKPAVYLTALAH 489
           +    +AVD  +G++ A VG       +R G     R   A R  GS +KP +Y   LA 
Sbjct: 343 ISIGIVAVDNANGDVLAHVGSADYFDDRRAGQVDMAR---AVRSPGSTLKPFIY--GLAF 397

Query: 490 PDQY-NLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGMKL 548
            D + +  + ++D+P+        A+ P N+D  ++G VP+  AL  SLNVP + L  ++
Sbjct: 398 EDGFVHPESLIDDRPVRF-----GAYAPDNFDMTFQGTVPVRKALQLSLNVPAIELLERV 452

Query: 549 GIDQVSATLGKLGVN----RDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSAL 604
           G  ++++ L + G      +DE  P  +M LG   +    + Q+Y  L   G   PL  +
Sbjct: 453 GAARLASRLKQAGTELVLPKDE-APGLAMGLGGVGIKLIDLVQLYSGLPRLGSVLPLREI 511

Query: 605 RSVLDLEGNVLYESLPRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAALAGKTG 664
            S     GN   E+L    + +DQ AAW         V  GT    NA  +   +A KTG
Sbjct: 512 AS----SGNDKRETL----RLMDQVAAW-----QVGSVLLGTPPPENAVRNQ--IAFKTG 556

Query: 665 TTNDNRDSWFVGVDGREVTTIWLGRDDNQP 694
           T+   RD+W VG DGR    +W+GR D  P
Sbjct: 557 TSYGYRDAWSVGFDGRMTIGVWVGRPDGAP 586