Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 675 a.a., penicillin-binding protein PbpC from Phaeobacter inhibens DSM 17395

 Score =  183 bits (464), Expect = 3e-50
 Identities = 167/520 (32%), Positives = 246/520 (47%), Gaps = 63/520 (12%)

Query: 196 LLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFLSSDRTLWRKL 255
           LL  ED+ FY H GV  LA+ RA    L  GR V GGSTL+ Q+A+ +   S      KL
Sbjct: 70  LLRYEDKRFYDHSGVDVLALLRAAAQALWRGRVVSGGSTLSMQVARLLEDGSTGRWAGKL 129

Query: 256 REAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQPLQELRIDQLA 315
           R+  +AL ++ R SK +ILE YL     G +    I G   AS  +FG+    L   + A
Sbjct: 130 RQIRLALALERRLSKAQILELYLIHAPFGGN----IEGVRAASYAWFGKEPSRLTPAEAA 185

Query: 316 LLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRPLDVQKTAQIA 375
           LLV + + P    P R  E AR  R+ VL+ M    +L A   + A   P+         
Sbjct: 186 LLVALPQAPEARRPDRMPEDARRARNRVLQRMRNAGVLAADAAETAAQAPM--------- 236

Query: 376 SRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHDQIPQLAKTAGKD 435
            R    F Q++  L + L    +     R+  +L+   Q +L Q + + + +        
Sbjct: 237 PRGMRVFPQLAPHLADYL--VAETPEQARIDLTLEAGLQQRLAQLLTESVAR----QDAR 290

Query: 436 LEAAAIAVDRHSGEIRAMVGGKRTGY-----DGFNRVLNASRQIGSLVKPAVYLTA---- 486
           L AA +  D  SGEI A VG   +GY      GF  +  A R  GS +KP VY  A    
Sbjct: 291 LSAAVLVADHQSGEILASVGS--SGYRDDLRQGFVDMTRAPRSPGSTLKPLVYGLAFDQG 348

Query: 487 LAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGM 546
           LAHP+     T + D P+ + G     + P+N+D ++RG++ +  AL  SLN P + L  
Sbjct: 349 LAHPE-----TLIHDGPIDIDG-----YAPQNFDGRFRGDLRIRRALQLSLNTPVIQLTQ 398

Query: 547 KLGIDQVSATLGKLGVNRDEI---RPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSA 603
            LG  ++ + L + G  R  +   +P  ++ LG   ++   + Q+Y  L  +G + P   
Sbjct: 399 ALGPARLMSALRRGGA-RPRLPGGKPGLAVALGGVGVSLRDLVQVYAGL-GAGGQGP--R 454

Query: 604 LRSVLDLEGNVLYESLPRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAALAGKT 663
           LR+ L       YE +PR+   V   +AW     ++ GV    G        +  +A KT
Sbjct: 455 LRARLQAP----YERMPRLMSKV---SAWQIGDILR-GVPPPAGA------PAGMVAYKT 500

Query: 664 GTTNDNRDSWFVGVDGREVTTIWLGRDDNQPTKLTGASGA 703
           GT+  +RD+W +G DGR V  +WLGR D  P  + GA GA
Sbjct: 501 GTSYGHRDTWAIGWDGRYVVGVWLGRADGTP--VPGAFGA 538