Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 758 a.a., penicillin-binding protein, 1A family from Phaeobacter inhibens DSM 17395

 Score =  246 bits (629), Expect = 3e-69
 Identities = 183/536 (34%), Positives = 267/536 (49%), Gaps = 42/536 (7%)

Query: 192 LVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGR---TVQGGSTLTQQLAKNIFLS-- 246
           L +A++ TED+ FY+H GVSP  +  A+ +NL+ GR   +  GGST+TQQ AK + L   
Sbjct: 174 LKNAIVATEDKRFYRHFGVSPRGVASAVRINLREGRGPLSGHGGSTITQQTAKLLCLGVV 233

Query: 247 -------SDR---------TLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADA 290
                  S+R         +LWRK +EA  A+ ++ +Y+KD IL  Y+N  YLG  GA  
Sbjct: 234 FDPTEWESERAYERDCRQGSLWRKAKEAIFAMAMEAKYTKDEILSIYMNRAYLG-GGA-- 290

Query: 291 IHGFGLASRLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEH 350
            +G   A++ YFG+   ++   + A+L G++  PS   P    +R+++R   VL+LM E 
Sbjct: 291 -YGAEAAAQRYFGKSANQVDASEAAMLAGLLTAPSTLAPTNNLQRSQDRAATVLRLMQEQ 349

Query: 351 DILTAPEYQQAVTRPLDVQKTAQIASRQPAYFQQ-VSIELKEKLGDKFKADSGLRVFTSL 409
             LT  E + A   P  + + A  A+R   YF   V   + +  G +   D  +R  T++
Sbjct: 350 GYLTTSEMRSAQNSPAVLSEAA--AARAGGYFADWVMDTIPDFFGSETTEDVVIR--TTI 405

Query: 410 DPVSQSKLEQAIHDQIPQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDG-FNRVL 468
           D   Q   E A++       +   K    AAI V    G +RAMVGG+++   G FNR  
Sbjct: 406 DQRLQRAAEDALNHVFDTKVREGSK--AQAAIVVMSADGAVRAMVGGRKSRVSGVFNRAT 463

Query: 469 NASRQIGSLVKPAVYLTALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVP 528
            A RQ GS  KP VY TAL     Y+    + D    L       W P+NY R++ GEV 
Sbjct: 464 QAKRQTGSAFKPFVYATALELG--YSPLDRVLDAQYCLDVPGSGQWCPKNYTRKFYGEVT 521

Query: 529 LYLALAQSLNVPTVALGMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQM 588
           L  AL  SLNVP V +   +G D V    G  G++  E+   P++ LG+   T  ++   
Sbjct: 522 LARALRDSLNVPAVKVSEAVGRDLVRRVAGDFGLD-SELAAGPALALGASESTLLEMTGA 580

Query: 589 YQTLTNSGKKA-PLSALRSVLDLEGNVLYESLPRVSQAVDQ-QAAWLTTYAMKQGVQEGT 646
           Y  + N G    P       L  +   +  +   + + V Q +AA    + M+Q V +G+
Sbjct: 581 YAGILNGGSSVTPYGVTELTLIGDNTPMMGASGGLGERVIQTKAARELIWMMEQVVSQGS 640

Query: 647 GRYLNAQFSSAALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPTKLTGASG 702
           GR   AQ      AGKTGTT   RD+WFVG     V  +W+G DDN P  L+G +G
Sbjct: 641 GR--RAQIPGWQAAGKTGTTQAARDAWFVGFTADYVAGVWMGYDDNTP--LSGVTG 692