Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 771 a.a., penicillin-binding protein, 1A family from Dechlorosoma suillum PS

 Score =  161 bits (407), Expect = 1e-43
 Identities = 94/275 (34%), Positives = 153/275 (55%), Gaps = 4/275 (1%)

Query: 147 LNKIESLEQKRELGYLRLEPKLMGMLEKDSPEQRLFLRRDQFPEVLVDALLVTEDRDFYQ 206
           L  +E L   R    LR+      ++ +   E+R  +R    P V+  A+L  ED  FYQ
Sbjct: 43  LPSLEVLTDYRPKIPLRVYSSDGALIGEFGEERRALVRIQDVPPVMKHAILAAEDERFYQ 102

Query: 207 HDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFLSSDRTLWRKLREAYMALIIDY 266
           H GV  L + RA V NL  G   QG ST+T Q+A+N FLSS++TL RK  EA ++  I++
Sbjct: 103 HGGVDTLGVLRAAVANLSGGGKRQGASTITMQVARNFFLSSEKTLSRKFYEALLSFKIEH 162

Query: 267 RYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQPLQELRIDQLALLVGMVKGPSY 326
             SKD IL+ Y+N++YLGQ      +GF  A+++YFG+ L ++ + + A+L G+ K PS 
Sbjct: 163 NLSKDEILQLYINQIYLGQRA----YGFAAAAQIYFGKSLNDITVAEAAMLAGLPKAPSS 218

Query: 327 YNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRPLDVQKTAQIASRQPAYFQQVS 386
           +NP+   +RAR R+  VL+ M E   +   ++++A+ + L V++ A   S    Y  +++
Sbjct: 219 FNPVVNPKRARLRQQYVLRRMHELHFIDDKQHEEALKQTLVVKRDANEFSVHADYVAEMA 278

Query: 387 IELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAI 421
            ++  +         GLRV+T++    Q    Q++
Sbjct: 279 RQIAAERFPDDVYTRGLRVYTTILKADQEAAYQSL 313



 Score =  153 bits (387), Expect = 3e-41
 Identities = 101/309 (32%), Positives = 155/309 (50%), Gaps = 19/309 (6%)

Query: 435 DLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTALAHPDQYN 494
           ++E+A +A D   G IRA+VGG     + +N V  A RQ GS  KP +Y  AL     Y 
Sbjct: 429 EVESAFVATDPRDGAIRALVGGFDFSRNKYNHVTQAWRQPGSSFKPFIYSAALEKG--YT 486

Query: 495 LATTLEDKPLTLKGSE--GSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGMKLGIDQ 552
            AT ++D P+ +  S    + W P NYD +Y G + L  ALA+S N+ ++ +   +G   
Sbjct: 487 PATIVQDSPIVIPASATGSTPWEPHNYDGKYEGPMKLRTALAKSKNMVSIRVLQAIGTQY 546

Query: 553 VSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRSVLDLEG 612
                 + G + ++  P  +M LG+ S+TP+Q+   Y    N G +     +R + D +G
Sbjct: 547 AQDYATRFGFDAEKHPPYLTMALGAGSVTPWQMVSAYAVFANGGYRIQPYVVRDIRDDKG 606

Query: 613 NVLYESLP-----RVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAALAGKTGTTN 667
           N+L ++ P       ++A+D + A+L    ++     GT    + Q     LAGKTGTTN
Sbjct: 607 NILAQAQPVPVGDEGNRAIDPRNAYLMDSMLRDVAIFGTAAKASVQLKRRDLAGKTGTTN 666

Query: 668 DNRDSWFVGVDGREVTTIWLGRDDNQPTKL----TGASGALRVYAQYLKYR---IPEKLQ 720
           D  D+WF G     V   W+G D  QP KL    TG   +L ++  Y+      +PE  Q
Sbjct: 667 DYIDAWFCGYQATVVGCAWVGFD--QPKKLGSGETGGLVSLPIWINYMHTALKDVPESFQ 724

Query: 721 LPWPEGITT 729
            P PEG+ +
Sbjct: 725 -PAPEGLVS 732