Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 807 a.a., penicillin-binding protein, 1A family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  155 bits (391), Expect = 1e-41
 Identities = 98/281 (34%), Positives = 158/281 (56%), Gaps = 33/281 (11%)

Query: 159 LGYLRLEPKLMGMLEKDSPEQRLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRA 218
           +GY   E + +  L+K SP              +  A L  ED  FY+H+G+ P+AI RA
Sbjct: 59  MGYFYREKRFLAPLDKMSPR-------------VPQAFLAAEDDGFYRHEGIDPIAIFRA 105

Query: 219 MVVNLKAGRTVQGGSTLTQQLAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYL 278
            + N++AG   QGGST+TQQ+ K + L+S+++  RK++EA +A  ++   SKD IL  YL
Sbjct: 106 FLKNMQAGSIKQGGSTITQQIVKRLLLTSEKSYERKIKEAILAYRLEKYLSKDEILTIYL 165

Query: 279 NEVYLGQSGADAIHGFGLASRLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARE 338
           N++YLG  GA   +G   A+R YFG+ + EL + + A++ G+ + PS YNP R  +  R+
Sbjct: 166 NQIYLG-GGA---YGVEAAARTYFGKHVNELSLAEAAVIGGLPQAPSKYNPFRDPDATRQ 221

Query: 339 RRDLVLKLMMEHDILTAPEYQQAVTRPLDVQKTAQIASRQPA-YFQQVSIEL-------- 389
           R+  VL  M++   +   EY +AV +PL  +       R+ A Y ++V  +L        
Sbjct: 222 RQMYVLHRMLDLGWINRAEYDEAVAQPLVYRSMDDSGWREGAWYLEEVRRQLIDFFSEAN 281

Query: 390 KEKLG---DKFKADS----GLRVFTSLDPVSQSKLEQAIHD 423
            ++LG   D++  D+    GL V TS++P+ QS  E+A+ +
Sbjct: 282 VKRLGLKVDRYGEDAIYELGLHVRTSMEPLHQSAAEKALRN 322



 Score =  150 bits (378), Expect = 3e-40
 Identities = 105/324 (32%), Positives = 157/324 (48%), Gaps = 24/324 (7%)

Query: 412 VSQSKLEQAIHDQIPQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNAS 471
           VSQ+ + Q   +Q P        D++ A + ++  +G++ A+VGG       FNR + A 
Sbjct: 443 VSQAGVIQLSLEQYP--------DVQGAVVTIEPDTGDVLALVGGYSFSDSQFNRAIQAR 494

Query: 472 RQIGSLVKPAVYLTALAHPDQYNLATTLEDKPLT-LKGSEGSAWTPRNYDRQYRGEVPLY 530
           RQ GS  KP VY  A+ H   +   + + D P   L       W P N++  + G   L 
Sbjct: 495 RQPGSSFKPIVYSAAMDHG--FTAGSVVLDAPFVYLNEYTDKIWRPENFEGVFYGPTLLR 552

Query: 531 LALAQSLNVPTVALGMKLGIDQVSATLGKLGVNRDEIRPVPSML---LGSFSLTPYQVAQ 587
            ALA+S N+ T+ +  K+GI  V      LG+      P P+ L   LG+ +++P  +A+
Sbjct: 553 TALAKSRNLCTIRVAQKIGIPAVIERATALGLEG----PFPNELSVSLGAVAVSPINMAE 608

Query: 588 MYQTLTNSGKKAPLSALRSVLDLEGNVLYESLPRVSQAVDQQAAWLTTYAMKQGVQEGTG 647
            Y      G+ A    + S+ D  G  L+ES P V + +  Q A++    MK+ VQ+GT 
Sbjct: 609 AYTAFAAEGRVAKRRFIHSIGDAWGETLFESKPDVREVLSPQNAFIMATLMKEVVQDGTA 668

Query: 648 RYLNAQFSSAALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPTKL--TGASGALR 705
               A+     LAGKTGTTND RD+WF+G     VT +++G D   P     TG   AL 
Sbjct: 669 T--KAKVLGKPLAGKTGTTNDERDAWFIGYTPHLVTAVYVGFDQVAPMGKFETGGRAALP 726

Query: 706 VYAQYLKYRIPE--KLQLPWPEGI 727
           ++  Y K   P+      P P GI
Sbjct: 727 IFVDYRKVVEPKYPADDFPMPPGI 750