Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 852 a.a., carboxypeptidase/penicillin-binding protein 1A from Klebsiella michiganensis M5al

 Score =  174 bits (440), Expect = 2e-47
 Identities = 91/249 (36%), Positives = 152/249 (61%), Gaps = 6/249 (2%)

Query: 178 EQRLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQ 237
           ++R+ +   Q P  L+ A + TED  FY+H GV P+ I RA  V + +G   QG ST+TQ
Sbjct: 64  KRRIPVTLQQMPPELIKAFIATEDSRFYEHHGVDPVGIFRAASVAMFSGHASQGASTITQ 123

Query: 238 QLAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLA 297
           QLA+N FLS ++TL RK++EA++A+ I+   +KD ILE YLN++YLG       +G G A
Sbjct: 124 QLARNFFLSPEKTLMRKVKEAFLAIRIEQLLNKDEILELYLNKIYLGYRA----YGVGAA 179

Query: 298 SRLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPE 357
           +++YFG+ + +L + ++A++ G+ K PS +NP+   +RA  RR++VL  M+    +T  +
Sbjct: 180 AQVYFGKSVDQLTLSEMAVIAGLPKAPSTFNPLYSMDRATARRNVVLSRMLSEGYITQSQ 239

Query: 358 YQQAVTRPLDVQ-KTAQIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSK 416
           Y QA ++ +D    T +IA   P   + V  E+  + G++   D G RV+T++   +Q  
Sbjct: 240 YDQARSQTIDASYHTPEIAFSSPYLSEMVRQEMVSRYGEQAYED-GYRVYTTITRKNQQS 298

Query: 417 LEQAIHDQI 425
            ++A+   +
Sbjct: 299 AQEAVRKNV 307



 Score =  102 bits (254), Expect = 9e-26
 Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 3/190 (1%)

Query: 435 DLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTALAHPDQYN 494
           D+ +A ++++  +G I A+VGG       FNR   A RQ+GS +KP +Y  A+       
Sbjct: 424 DVNSALVSINPQNGAIIALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAM--DKGLT 481

Query: 495 LATTLEDKPLTL-KGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGMKLGIDQV 553
           LA+ L D P++      GS W P+N   QY G + L   L QS NV  V     +G+D  
Sbjct: 482 LASMLNDVPISRWDAGSGSDWRPKNSPPQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYA 541

Query: 554 SATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRSVLDLEGN 613
           +  L + G     I    S+ LGS S TP QVA+ Y  + N G       +  + + +G 
Sbjct: 542 AEYLQRFGFPAQNIVRTESLALGSASFTPLQVARGYSVMANGGFLVSPYFISKIENDQGG 601

Query: 614 VLYESLPRVS 623
           V++E  P+V+
Sbjct: 602 VIFEERPKVA 611



 Score = 50.1 bits (118), Expect = 5e-10
 Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)

Query: 645 GTGRYLNAQFSSAALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDN-QPTKLTGASGA 703
           GTG           + GKTGTTN ++D+WF G     VT++W+G DD+ +    T ASGA
Sbjct: 700 GTGWRAGRDLQRHDIGGKTGTTNSSKDAWFSGYGPGVVTSVWIGFDDHRRDLGRTTASGA 759

Query: 704 LR 705
           ++
Sbjct: 760 IK 761