Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 700 a.a., penicillin-binding protein, 1A family from Sphingomonas koreensis DSMZ 15582

 Score =  246 bits (627), Expect = 4e-69
 Identities = 180/534 (33%), Positives = 273/534 (51%), Gaps = 39/534 (7%)

Query: 187 QFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLK---AGRTVQGGSTLTQQLAKNI 243
           + P  + DA++  EDR F  H GV P+A+ R            R +QG ST+TQQ+A+ I
Sbjct: 85  KIPAPMRDAMVSIEDRRFRSHWGVDPVALARITKFAFDHRGTDRRLQGASTITQQVARTI 144

Query: 244 FLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFG 303
           FLS+   + RKLRE  +AL ++ +++KD+ILE YLN+VY G  GA   +G   ASR +FG
Sbjct: 145 FLSNKYDVGRKLREMVLALALERKFTKDQILELYLNKVYFG-GGA---YGIDAASRTFFG 200

Query: 304 QPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVT 363
            P   L + + A++ G+VK PS Y+P   AE A  R  +VL +M+E   LT  +   A  
Sbjct: 201 HPATNLTLSESAVIAGLVKAPSRYSPTADAEAAIGRASVVLDVMVETGALTRAQADAA-- 258

Query: 364 RPLDVQKTAQIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHD 423
           RP +V+  A        YF   ++   E L D+ +A   L V+T++D   Q+   QAI  
Sbjct: 259 RPAEVKLAAAPKQNSVRYFTDWALPQLEVLIDETEAP--LDVWTTIDLRMQNAATQAIQA 316

Query: 424 QIPQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVY 483
             P  A       + A +++DR  G +RAMVGG+      +NR   A+RQ GS  K  VY
Sbjct: 317 NTPAGA-------QGALVSLDR-DGAVRAMVGGRDYVSSIYNRATQATRQPGSAFKLFVY 368

Query: 484 LTALA---HPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVP 540
           L AL     PD       + D+P+T+ G     W+PRN   ++ GE+ L  A A S+N  
Sbjct: 369 LAALEAGHKPDD-----QVVDEPVTIGG-----WSPRNNSGRFSGEMSLRSAFAYSINTV 418

Query: 541 TVALGMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAP 600
              LG ++G   V+    + G+    +   P+M+LG+ ++    + + + ++ N G    
Sbjct: 419 AAKLGQEVGFGTVADMARRFGIT-TPVNTQPAMVLGTSNVRLIDMTRAFASVANKGVGVT 477

Query: 601 LSALRSVLDLEGNVLYESLPRVSQA-VDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAAL 659
             A+  V    G V+Y+     S+  V    A   T  M+  V  G+G+   A      +
Sbjct: 478 PYAITRV-TANGAVIYQHEVDTSRVLVAPYVAAQMTDLMQTAVATGSGK---AAQIGRPV 533

Query: 660 AGKTGTTNDNRDSWFVGVDGREVTTIWLGRDD-NQPTKLTGASGALRVYAQYLK 712
           AGKTGTT  N+D WF+G      T +W+GRDD  +   L G +   R +A +++
Sbjct: 534 AGKTGTTTSNKDGWFLGFSSGLTTGVWMGRDDAKRVGGLQGGAAPARAFAAFMR 587